[Bioc-devel] mzR update in the making: any Travis experts ?
Neumann, Steffen
@neum@nn @end|ng |rom |pb-h@||e@de
Mon Mar 4 20:34:05 CET 2019
Hi,
TL;DR: How can I get to see the *.log files for more information ?!
I am working on an upgrade of the C++ code in mzR,
which is challenging to build cross-platform,
so we use travis to check before pushing/breaking BioC.
The Travis config [1] is fairly simple, with main modification
that we increase the timeouts.
Issue is, the builds in [2] e.g. don't give me enough information
why the build fails. Build is OK:
Still running (9 of 40): R CMD build .
The command R CMD build . exited with 0.
but check fails:
Still running (1 of 40): R CMD check --no-build-vignettes --no-
vignettes mzR_2.17.1.tar.gz
The command R CMD check --no-build-vignettes --no-vignettes
mzR_2.17.1.tar.gz exited with 1.
and logs are not informative enough:
* checking whether package ‘mzR’ can be installed ... ERROR
Installation failed.
See ‘/home/travis/build/sneumann/mzR/mzR.Rcheck/00install.out’ for
details.
* DONE
Status: 1 ERROR, 2 NOTEs
See ‘/home/travis/build/sneumann/mzR/mzR.Rcheck/00check.log’ for
details.
=> How can I get to see the *.log files for more information ?!
Thanks in advance,
Yours,
Steffen
[1]
https://github.com/sneumann/mzR/blob/feature/updatePwiz20190301/.travis.yml#L22
[2] https://travis-ci.org/sneumann/mzR/branches
[3] https://travis-ci.org/sneumann/mzR/builds/501622960
--
IPB Halle AG Massenspektrometrie & Bioinformatik
Dr. Steffen Neumann http://www.IPB-Halle.DE
Weinberg 3 Tel. +49 (0) 345 5582 - 1470
06120 Halle +49 (0) 345 5582 - 0
sneumann(at)IPB-Halle.DE Fax. +49 (0) 345 5582 - 1409
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