[Bioc-devel] package rJava can not be loaded in build system OS X

Zheng Wei wzwz @end|ng |rom @t@n|ord@edu
Thu Apr 25 23:08:43 CEST 2019

Dear all,

I find package rJava is not available in build system OS X. 

My package esATAC depends on this package so it causes ERROR when building. The ERROR is pasted below.

Is there anyone can fix this problem? 



** byte-compile and prepare package for lazy loading Error: .onLoad failed in loadNamespace() for 'rJava', details:   call: dyn.load(file, DLLpath = DLLpath, ...)   error: unable to load shared object '/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so':   dlopen(/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so, 6): Library not loaded: /Library/Java/JavaVirtualMachines/jdk-11.0.1.jdk/Contents/Home/lib/server/libjvm.dylib   Referenced from: /Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so   Reason: image not found Execution halted ERROR: lazy loading failed for package ��esATAC�� * removing ��/Library/Frameworks/R.framework/Versions/3.6/Resources/library/esATAC��
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