[Bioc-devel] Timeout in check for a new submission
Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Fri Apr 5 16:40:07 CEST 2019
If the check time is passing on the other platforms, and the windows check isn't incredibly over the time limit, you should be okay. Talk with your reviewer but in general we would make an exception for this warning.
Most of the time subsets of data can be used for examples and vignettes which also help to reduce the check time but still retain usefulness of an application, without knowing your data just an example instead of running over all chromosomes, limit to one smaller chromosome, etc... If this has already been done then you should be able to proceed through the submission process despite this warning.
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Bernat Gel Moreno <bgel using igtp.cat>
Sent: Friday, April 5, 2019 10:27:21 AM
To: bioc-devel using r-project.org
Subject: [Bioc-devel] Timeout in check for a new submission
I've submitted a new package (CopyNumberPlots, issue 1076) and I have a
problem. It keeps giving me a warning because on windows it takes more
than 5 minutes to check (in Lunix it works with no problems). I've
reduced the examples, removed part of the vignette... and in my machine
it take 3min 20seconds to check, of which only 30seconds are spent in
the examples and vignette and the other 2min 50 seconds are spent in all
Other than reducing the vignette and examples I don't know how to reduce
the cheking time. Any pointers?
Thanks a lot
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