[Bioc-devel] Error: file larger than 5 Mb.

Bohdan Khomtchouk khomtchoukmed @ending from gm@il@com
Wed Sep 26 03:33:25 CEST 2018


Here it is:
https://github.com/Bohdan-Khomtchouk/geneXtendeR/blob/master/data/mouse.rda


On Tue, Sep 25, 2018 at 6:23 PM Vincent Carey <stvjc using channing.harvard.edu>
wrote:

> (resending with reply all -- please reply to this one)
>
> Can you say some more about the content of the file?  Perhaps it can be
> placed in ExperimentHub.  "mouse.rda" is not very descriptive.  is it
> in your github repo?
>
>
> On Tue, Sep 25, 2018 at 6:25 PM, Bohdan Khomtchouk <
> khomtchoukmed using gmail.com> wrote:
>
>> I need to include an important .rda file in the /data folder of my
>> Bioconductor package.  However, this .rda file exceeds 5 Mb in size.  Do I
>> have any other options besides for deleting it?
>>
>> bohdankhomtchouk$ git push origin master
>>
>> Counting objects: 65, done.
>>
>> Delta compression using up to 8 threads.
>>
>> Compressing objects: 100% (65/65), done.
>>
>> Writing objects: 100% (65/65), 13.79 MiB | 7.62 MiB/s, done.
>>
>> Total 65 (delta 30), reused 0 (delta 0)
>>
>> remote: Error: file larger than 5 Mb.
>>
>> remote:
>>
>> remote:     File name: 'data/mouse.rda'
>>
>> remote:     File size: 12.9 Mb
>>
>> remote:
>>
>> remote: Please see Biocondcutor guidelines
>>
>> remote: https://bioconductor.org/developers/package-guidelines/
>>
>> remote:
>>
>> To git.bioconductor.org:packages/geneXtendeR
>>
>>  ! [remote rejected] master -> master (pre-receive hook declined)
>>
>> error: failed to push some refs to 'git using git.bioconductor.org:
>> packages/geneXtendeR'
>>
>> --
>> Bohdan Khomtchouk, Ph.D.
>> AHA Postdoctoral Fellow, Gozani & Assimes Labs
>> Department of Biology & Department of Medicine
>> Division of Cardiovascular Medicine
>> Stanford University
>> Stanford, CA 94305
>> https://profiles.stanford.edu/bohdan-khomtchouk
>>
>>
>> CONFIDENTIALITY NOTICE: Information contained in this me...{{dropped:9}}
>>
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>
>
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