[Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

Martin Morgan mtmorg@n@bioc @ending from gm@il@com
Wed Sep 5 12:20:15 CEST 2018


after I

   git clone git using git.bioconductor.org:packages/BUScorrect

This is the log that I see

BUScorrect master$ git log --name-only -n 2
commit 5ccfa7ce4f665f3ffbc55b26a5cd81beaafd3293
Author: Xiangyu Luo <xyluo1991 using gmail.com>
Date:   Fri Aug 31 19:10:32 2018 +0800

     version bump

DESCRIPTION

commit 1a61e2971a7cc213704797b99c5447847332b39f
Author: Xiangyu Luo <xyluo1991 using gmail.com>
Date:   Tue Aug 28 21:45:34 2018 +0800

     version bump to 0.99.9

DESCRIPTION

BUScorrect master$ ls inst/
NEWS.Rd  unitTests


Are you sure that you have added the citation file to your local git 
repository, and pushed the local repository to git.bioconductor.org?

On 09/05/2018 06:15 AM, Xiangyu Luo wrote:
> Dear Martin,
> 
> Thank you very much for the information! I have pushed my changes, 
> bumped the version, and waited for a successful nightly build, but the 
> citation result did not change.  I am wondering whether the CITATION 
> file should be in "inst" folder?
> 
> Best,
> 
> Xiangyu
> 
> 
> 
> On Tue, Sep 4, 2018 at 9:05 PM Martin Morgan <mtmorgan.bioc using gmail.com 
> <mailto:mtmorgan.bioc using gmail.com>> wrote:
> 
>     Have you pushed your changes to
>     git using git.bioconductor.org:packages/BUScorrect and waited for a
>     successful
>     nightly build
> 
>     http://bioconductor.org/checkResults/devel/bioc-LATEST/BUScorrect/
> 
>     ?
> 
>     On 09/03/2018 07:10 AM, Xiangyu Luo wrote:
>      > Dear All,
>      >
>      > The citation information of my "BUScorrect" R package is shown as
>     an R
>      > package version (e.g., xxx, xxx, R package version 0.99.10.), but
>     I want it
>      > to be my original paper (e.g., xxx, xxx, JournalName).
>      >
>      > I tried to manually insert the "CITATION" file in the "inst"
>     folder, as
>      > described in
>      >
>     https://cran.r-project.org/doc/manuals/r-release/R-exts.html#CITATION-files.
>      > It works if the package is installed locally. However, when the
>     package is
>      > installed from the Bioconductor platform, the citation is still the R
>      > package version.  I am wondering how to change the citation on
>     Bioconductor?
>      >
>      > Many thanks for your great help!
>      >
>      > Xiangyu
>      >
>      >       [[alternative HTML version deleted]]
>      >
>      > _______________________________________________
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>      >
>



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