[Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

Xiangyu Luo xyluo1991 @ending from gm@il@com
Wed Sep 5 12:26:04 CEST 2018


Dear Martin,

For version 0.9.9, I inserted a CITATION into the "inst", but it did not
work. Therefore, in version 0.9.10, I took the CITATION file out of the
"inst", but it still did not work. Thank you so much for your patience and
guidance!

Best regards,

Xiangyu

On Wed, Sep 5, 2018 at 6:20 PM Martin Morgan <mtmorgan.bioc using gmail.com>
wrote:

> after I
>
>    git clone git using git.bioconductor.org:packages/BUScorrect
>
> This is the log that I see
>
> BUScorrect master$ git log --name-only -n 2
> commit 5ccfa7ce4f665f3ffbc55b26a5cd81beaafd3293
> Author: Xiangyu Luo <xyluo1991 using gmail.com>
> Date:   Fri Aug 31 19:10:32 2018 +0800
>
>      version bump
>
> DESCRIPTION
>
> commit 1a61e2971a7cc213704797b99c5447847332b39f
> Author: Xiangyu Luo <xyluo1991 using gmail.com>
> Date:   Tue Aug 28 21:45:34 2018 +0800
>
>      version bump to 0.99.9
>
> DESCRIPTION
>
> BUScorrect master$ ls inst/
> NEWS.Rd  unitTests
>
>
> Are you sure that you have added the citation file to your local git
> repository, and pushed the local repository to git.bioconductor.org?
>
> On 09/05/2018 06:15 AM, Xiangyu Luo wrote:
> > Dear Martin,
> >
> > Thank you very much for the information! I have pushed my changes,
> > bumped the version, and waited for a successful nightly build, but the
> > citation result did not change.  I am wondering whether the CITATION
> > file should be in "inst" folder?
> >
> > Best,
> >
> > Xiangyu
> >
> >
> >
> > On Tue, Sep 4, 2018 at 9:05 PM Martin Morgan <mtmorgan.bioc using gmail.com
> > <mailto:mtmorgan.bioc using gmail.com>> wrote:
> >
> >     Have you pushed your changes to
> >     git using git.bioconductor.org:packages/BUScorrect and waited for a
> >     successful
> >     nightly build
> >
> >     http://bioconductor.org/checkResults/devel/bioc-LATEST/BUScorrect/
> >
> >     ?
> >
> >     On 09/03/2018 07:10 AM, Xiangyu Luo wrote:
> >      > Dear All,
> >      >
> >      > The citation information of my "BUScorrect" R package is shown as
> >     an R
> >      > package version (e.g., xxx, xxx, R package version 0.99.10.), but
> >     I want it
> >      > to be my original paper (e.g., xxx, xxx, JournalName).
> >      >
> >      > I tried to manually insert the "CITATION" file in the "inst"
> >     folder, as
> >      > described in
> >      >
> >
> https://cran.r-project.org/doc/manuals/r-release/R-exts.html#CITATION-files
> .
> >      > It works if the package is installed locally. However, when the
> >     package is
> >      > installed from the Bioconductor platform, the citation is still
> the R
> >      > package version.  I am wondering how to change the citation on
> >     Bioconductor?
> >      >
> >      > Many thanks for your great help!
> >      >
> >      > Xiangyu
> >      >
> >      >       [[alternative HTML version deleted]]
> >      >
> >      > _______________________________________________
> >      > Bioc-devel using r-project.org <mailto:Bioc-devel using r-project.org>
> >     mailing list
> >      > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> >      >
> >
>

	[[alternative HTML version deleted]]



More information about the Bioc-devel mailing list