[Bioc-devel] Moving Package from SVN to Git

Turaga, Nitesh Nitesh.Turaga at RoswellPark.org
Wed Mar 28 19:16:27 CEST 2018

I just processed the keys today. Please try again.



> On Mar 28, 2018, at 1:12 PM, Tomasz Stokowy <tomasz.stokowy at k2.uib.no> wrote:
> Dear bioc-devel,
> I am moving my package RareVariantVis to GitHub following steps listed here:
> https://bioconductor.org/developers/how-to/git/maintain-github-bioc/
> I submitted my rsa key to Bioconductor and Github and I can connect to Github:
> Tomaszs-MBP:.ssh tomaszstokowy$ ssh -T git at github.com
> Enter passphrase for key '/Users/tomaszstokowy/.ssh/id_rsa':
> Hi tstokowy! You've successfully authenticated, but GitHub does not provide shell access.
> On another hand it seems I can not move content from SVN to GitHub. When following steps from
> https://bioconductor.org/developers/how-to/git/maintain-github-bioc/
> In step 7 I get "Could not read from remote repository"
> Tomaszs-MBP:RareVariantVis tomaszstokowy$ git clone https://github.com/tstokowy/RareVariantVis.git
> Cloning into 'RareVariantVis'...
> warning: You appear to have cloned an empty repository.
> Checking connectivity... done.
> Tomaszs-MBP:RareVariantVis tomaszstokowy$ cd RareVariantVis/
> Tomaszs-MBP:RareVariantVis tomaszstokowy$ git remote add upstream git at git.bioconductor.org:packages/RareVariantVis.git
> Tomaszs-MBP:RareVariantVis tomaszstokowy$ git fetch upstream
> git at git.bioconductor.org: Permission denied (publickey).
> fatal: Could not read from remote repository.
> Please make sure you have the correct access rights
> and the repository exists.
> I will be thankful for your suggestions how to fix this.
> Kind regards,
> -- 
> Tomasz Stokowy PhD
> Senior Engineer
> Department of Clinical Science
> University of Bergen, Norway
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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