[Bioc-devel] SVN to GIT

Turaga, Nitesh Nitesh.Turaga at RoswellPark.org
Tue Mar 13 14:58:43 CET 2018


Hi Val,

Just checked Nicholas’ key, but I think his key is bad (spaces). Either way, 

	ssh-keygen -l -f <key> 

does not validate.

> On Mar 13, 2018, at 8:48 AM, Obenchain, Valerie <Valerie.Obenchain at RoswellPark.org> wrote:
> 
> Nitesh,
> 
> Were the submitted keys invalid? Any idea why Nicolas didn't received an email?
> 
> Val
> 
> 
> 
> On 03/13/2018 02:37 AM, Servant Nicolas wrote:
>> Dear Valerie,
>> 
>> I submitted my ssh key but did not receive any confirmation mail that it has been done. And the git command still crashes.
>> Anything else I can do ?
>> Thank you
>> Nicolas
>> 
>> Le 09/03/2018 à 18:15, Obenchain, Valerie a écrit :
>>> Keys are processed once a day around 9am EST. You will get an email indicating if your submission was successful or not.
>>> 
>>> Valerie
>>> 
>>> 
>>> On 03/09/2018 09:11 AM, Obenchain, Valerie wrote:
>>>> Nicolas,
>>>> 
>>>> You  need to follow instructions to submit an SSH key:
>>>> 
>>>>   https://bioconductor.org/developers/how-to/git/maintain-github-bioc/
>>>> 
>>>> Specifically, you need to fill out this form using n.servant as your username:
>>>> 
>>>>   https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform
>>>> 
>>>> Valerie
>>>> 
>>>> 
>>>> 
>>>> On 03/09/2018 08:47 AM, Servant Nicolas wrote:
>>>>> Thank you very much.
>>>>> The point is that I cannot checkout because I guess BioC does not know 
>>>>> my SSH keys.
>>>>> 
>>>>>  >>git clone 
>>>>> git at git.bioconductor.org:packages/HiTC
>>>>> 
>>>>> Cloning into 'HiTC'...
>>>>> Permission denied (publickey).
>>>>> fatal: Could not read from remote repository.
>>>>> 
>>>>> How can I fix this ?
>>>>> Thanks
>>>>> 
>>>>> 
>>>>> Le 09/03/2018 à 17:43, Turaga, Nitesh a écrit :
>>>>> 
>>>>>> http://bioconductor.org/developers/how-to/git/
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>>> On Mar 9, 2018, at 11:42 AM, Servant Nicolas <nicolas.servant at curie.fr>
>>>>>>>  wrote:
>>>>>>> 
>>>>>>> Can anyone help me ?
>>>>>>> If you have any links or tutorial, it would be useful.
>>>>>>> Thanks
>>>>>>> 
>>>>>>> Le 06/03/2018 à 10:04, Servant Nicolas a écrit :
>>>>>>> 
>>>>>>>> Dear all,
>>>>>>>> 
>>>>>>>> I try a couple of weeks ago to move to git to maintain the HiTC package,
>>>>>>>> but I did not succeed.
>>>>>>>> I followed the guidelines here ;
>>>>>>>> 
>>>>>>>> 
>>>>>>>> https://bioconductor.org/developers/how-to/git/maintain-github-bioc/
>>>>>>>> 
>>>>>>>> 
>>>>>>>> But when I try to fetch the BioC repo, it does not work
>>>>>>>> 
>>>>>>>> $ git fetch upstream
>>>>>>>> The authenticity of host 'git.bioconductor.org (34.192.48.227)' can't be
>>>>>>>> established.
>>>>>>>> ECDSA key fingerprint is SHA256:nXILc5fVCnDfOID8HgPi+mSufGtr2JMYgnRa1JAQj/Q.
>>>>>>>> Are you sure you want to continue connecting (yes/no)? yes
>>>>>>>> Warning: Permanently added 'git.bioconductor.org,34.192.48.227' (ECDSA)
>>>>>>>> to the list of known hosts.
>>>>>>>> Permission denied (publickey).
>>>>>>>> fatal: Could not read from remote repository.
>>>>>>>> Please make sure you have the correct access rights and the repository
>>>>>>>> exists.
>>>>>>>> 
>>>>>>>> I also did something with my ssh key from here
>>>>>>>> 
>>>>>>>> https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform
>>>>>>>> 
>>>>>>>> but nothing happen.
>>>>>>>> Could you help me fixing this point ?
>>>>>>>> Many thanks. Best
>>>>>>>> Nicolas
>>>>>>>> 
>>>>>>>> 
>>>>>>>> 	[[alternative HTML version deleted]]
>>>>>>>> 
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>>>>>>>> 
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