[Bioc-devel] The warning about 'biocLite()'

r04945002 m@ili@g off @tu@edu@tw r04945002 m@ili@g off @tu@edu@tw
Mon Aug 27 22:31:50 CEST 2018


Ok, Thank you very much.

Best,
Ti Tai

引述 "Shepherd, Lori" <Lori.Shepherd using RoswellPark.org>:

> Your package does look clean for BiocInstaller/biocLite -  looking  
> at the dependency I think this is coming from when your package is  
> Installed and from the dependency gage  that has not been updated  
> yet.   I think you can safely ignore this warning and when gage is  
> updated it should automatically disappear.
>
>
> Cheers,
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> ________________________________
> From: r04945002 using ntu.edu.tw <r04945002 using ntu.edu.tw>
> Sent: Monday, August 27, 2018 3:27:39 AM
> To: Shepherd, Lori
> Cc: bioc-devel
> Subject: Re: [Bioc-devel] The warning about 'biocLite()'
>
> Hi,
>
> It's anamiR.
>
> Best,
> Ti Tai Wang
>
> 引述 "Shepherd, Lori" <Lori.Shepherd using RoswellPark.org>:
>
>> What is the name of your package?
>>
>>
>> It is possible it could be coming from one of the packages you
>> depend or import.  If you are sure you replaced all the instances in
>> your package this could be the case.
>>
>>
>> Lori Shepherd
>>
>> Bioconductor Core Team
>>
>> Roswell Park Cancer Institute
>>
>> Department of Biostatistics & Bioinformatics
>>
>> Elm & Carlton Streets
>>
>> Buffalo, New York 14263
>>
>> ________________________________
>> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
>> r04945002 using ntu.edu.tw <r04945002 using ntu.edu.tw>
>> Sent: Sunday, August 26, 2018 4:26:05 PM
>> To: bioc-devel
>> Subject: [Bioc-devel] The warning about 'biocLite()'
>>
>> Hi,
>>
>> I have already use 'BiocManager' to replace every 'biocLite' in my
>> code, like vignette and README, but I still got "Warning:
>> 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager'
>> CRAN" in my report. Any suggestion?
>>
>> Best,
>> Ti Tai
>>
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>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
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