[Bioc-devel] The warning about 'biocLite()'

[Shepherd, Lori]

Your package does look clean for BiocInstaller/biocLite -  looking at the dependency I think this is coming from when your package is Installed and from the dependency gage  that has not been updated yet.   I think you can safely ignore this warning and when gage is updated it should automatically disappear.


Cheers,


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: r04945002 using ntu.edu.tw <r04945002 using ntu.edu.tw>
Sent: Monday, August 27, 2018 3:27:39 AM
To: Shepherd, Lori
Cc: bioc-devel
Subject: Re: [Bioc-devel] The warning about 'biocLite()'

Hi,

It's anamiR.

Best,
Ti Tai Wang

$B0z=R(B "Shepherd, Lori" <Lori.Shepherd using RoswellPark.org>:

> What is the name of your package?
>
>
> It is possible it could be coming from one of the packages you
> depend or import.  If you are sure you replaced all the instances in
> your package this could be the case.
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> ________________________________
> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> r04945002 using ntu.edu.tw <r04945002 using ntu.edu.tw>
> Sent: Sunday, August 26, 2018 4:26:05 PM
> To: bioc-devel
> Subject: [Bioc-devel] The warning about 'biocLite()'
>
> Hi,
>
> I have already use 'BiocManager' to replace every 'biocLite' in my
> code, like vignette and README, but I still got "Warning:
> 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager'
> CRAN" in my report. Any suggestion?
>
> Best,
> Ti Tai
>
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> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
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