[Bioc-devel] Cannot move 'xps' to GIT

[cstrato]

Dear Martin,

Thank you for your informative reply.

1, My SSH public key that you mentioned is the correct one.



2, After following your advice and running

   ssh -v git at git.bioconductor.org

I got:

OpenSSH_7.4p1, LibreSSL 2.5.0
debug1: Reading configuration data /etc/ssh/ssh_config
debug1: Connecting to git.bioconductor.org [34.192.48.227] port 22.
debug1: Connection established.
debug1: identity file /Users/rabbitus/.ssh/id_rsa type 1
debug1: key_load_public: No such file or directory
...
debug1: Remote: PTY allocation disabled.
PTY allocation request failed on channel 0
hello c.stratowa, this is git at ip-172-30-0-33 running gitolite3 
v3.6.6-6-g7c8f0ab on git 2.13.0
...
bash: debug1:: command not found



3, Nevertheless, I could run:

   git clone git at git.bioconductor.org:packages/xps

I got:
Cloning into 'xps'...
Enter passphrase for key '/Users/rabbitus/.ssh/id_rsa':
remote: Counting objects: 2757, done.
remote: Compressing objects: 100% (2741/2741), done.
remote: Total 2757 (delta 2077), reused 0 (delta 0)
Receiving objects: 100% (2757/2757), 5.62 MiB | 945.00 KiB/s, done.
Resolving deltas: 100% (2077/2077), done.
Checking connectivity... done.



4, In 'https://github.com/settings/keys' I deleted the old SSH key and 
tried to add a new SSH key, where in 'Key' I copied once again my public 
'id_rsa'. However, once again I received an email with the wrong key 
'df:2d:78:4f:**'

I do not understand why my correct key is not accepted.

According to 'https://caius.github.io/github_id/' my user id is:
cstrato is github user #32616897

My public key at 'https://github.com/cstrato.keys' is still empty.


I am not sure what I need to do next?

Thank you.
Best regards,
Christian


On 10/12/17 19:40, Martin Morgan wrote:
> On 10/08/2017 01:37 PM, cstrato wrote:
>> Dear all,
>>
>> I wanted to update my package 'xps' and realized that I can no longer 
>> use 'svn commit'
>>
>> In order to use GIT I did the following:
>>
>>
>> 1, I created a public key '~/.ssh/id_rsa.pub'
>>
>>
>> 2, I did submit my 'SSH public key or github id to Bioconductor', 
>> using the 'git/svn transition: ssh keys' form.
>>
>> Here I entered my SVN user id, but it was not clear what my ID is.
>> So I checked 'svn info' and used  first my name 'c.stratowa' as SVN 
>> user id.
>> Since I did not succeed I repeated the procedure and used the UUID as 
>> SVN user id.
>>
>> Is this correct, or how do I get my SVN user id?
>>
>>
>> 3, I created a new GitHub repository:
>>
>> https://github.com/cstrato/xps
>>
>>
>> 4, Then I tried to clone the empty repository from GitHub. Here is the 
>> result:
>>
>> iMac:GIT cstrato$ git clone https://github.com/cstrato/xps.git
>> Cloning into 'xps'...
>> warning: You appear to have cloned an empty repository.
>> Checking connectivity... done.
>> iMac:GIT cstrato$ git clone https://github.com/cstrato/xps.git
>> fatal: destination path 'xps' already exists and is not an empty 
>> directory.
>> iMac:GIT cstrato$ cd xps
>> iMac:xps cstrato$ git remote add upstream 
>> git at git.bioconductor.org:packages/xps.git
>> iMac:xps cstrato$ git fetch upstream
>> Permission denied (publickey).
>> fatal: Could not read from remote repository.
> 
> there's a single public key associated with access to xps, ending with
> 
>    /m+bdjnFrDw5Fod8Sa9zDh2vXcICrNcxWGds2rbG3Q==
> 
> that should correspond to one of the public keys in your ~/.ssh/ 
> directory. If not, resubmit the form with You can try
> 
>    ssh -v git at git.bioconductor.org
> 
> and try to diagnosis why this public key is not being matched; a 
> possibility is FAQ #15 where git is choosing the wrong key
> 
>    https://bioconductor.org/developers/how-to/git/faq/
> 
>>
>> Please make sure you have the correct access rights
>> and the repository exists.
>>
>>
>> 5, I realized that I needed to add my public key to:
>> https://github.com/settings/keys
>>
>> The email I got was:
>> The following SSH key was added to your account:
>> iMac
>> df:2d:**:**:** etc
> 
> no, that doesn't look like an ssh key, it looks like a MAC address.
> 
> What's you're github user id? the link https://github.com/settings/keys 
> is only useful to you. My public key is at https://github.com/mtmorgan.keys
> 
>>
>> If you believe this key was added in error, you can remove the key and 
>> disable access at the following location:
>> https://github.com/settings/keys
>>
>>
>> Now my questions are:
>>
>> Do you think the SSH key should look as the one I got?
>>
>> What did I do wrong?
>>
>> Why do I get: permission denied?
>>
>>
>> Thank you.
>> Best regards,
>> Christian
>> _._._._._._._._._._._._._._._._._._
>> C.h.r.i.s.t.i.a.n   S.t.r.a.t.o.w.a
>> V.i.e.n.n.a           A.u.s.t.r.i.a
>> e.m.a.i.l:        cstrato at aon.at
>> _._._._._._._._._._._._._._._._._._
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
> 
> 
> This email message may contain legally privileged and/or confidential 
> information.  If you are not the intended recipient(s), or the employee 
> or agent responsible for the delivery of this message to the intended 
> recipient(s), you are hereby notified that any disclosure, copying, 
> distribution, or use of this email message is prohibited.  If you have 
> received this message in error, please notify the sender immediately by 
> e-mail and delete this email message from your computer. Thank you.
>