[Bioc-devel] Error in BUILD report (anamiR)

王棣台 r04945002 at ntu.edu.tw
Thu May 4 17:28:36 CEST 2017


Hi all,

It turns out that this error is related to the RMySQL package(CRAN),
and only happened in windows operating system.

https://github.com/rstats-db/RMySQL/issues/190

It looks like it can be solved only if we downgraded the RMySQL version now.
Can I choose not to import the newest RMySQL version while being tested in the BUILDREPORT?


Ti-Tai

________________________________________
從: Obenchain, Valerie [Valerie.Obenchain at RoswellPark.org]
寄件日期: 2017年4月16日 上午 10:58
至: 王棣台; bioc-devel at r-project.org
主旨: Re: [Bioc-devel]  Error in BUILD report (anamiR)

It looks like this has been resolved on today's report:

http://www.bioconductor.org/checkResults/devel/bioc-LATEST/

Valerie


On 04/07/2017 02:21 PM, 王棣台 wrote:
> Hi all,
>
> I got en error when it tries to create vignette in BUILD:
> tokay2  Windows Server 2012 R2 Standard / x64
>
> Error: processing vignette 'IntroductionToanamiR.Rmd' failed with diagnostics:
> could not run statement: Lost connection to MySQL server during query
>
> But for Linux or Mac, it all works.
> I have no idea how to solve this problem.
>
> Many thanks,
> Ti-Tai
>
>       [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>



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