[Bioc-devel] report package issue to Bioconductor

Obenchain, Valerie Valerie.Obenchain at roswellpark.org
Fri Jan 6 19:39:21 CET 2017


On 01/06/2017 09:53 AM, Obenchain, Valerie wrote:
> Hi,
>
> It looks like CorMut doesn't have a github repo so the best approach is
> to contact the maintainer directly or cc them (zpli21 at gmail.com) instead
> of creating your own gist. Maybe you've tried this? Once the transition

I should have been more clear here and said ... "Once the Bioconductor
package repo has been transitioned from svn to git / github ...".
The goal is to have the transition finalized before the spring release.

Valerie
> from svn to git / github is complete you can open issues or submit a
> pull request directly to the package repo.
>
> Valerie
>
> On 01/03/2017 11:39 PM, Yu, Guangchuang wrote:
>> Dear all,
>>
>> Some packages never updated after they publish a paper, and they just
>> ignore bug report.
>>
>> I think we need somewhere, maybe on github, to post code review and
>> Bioconductor core team can take action if maintainer fail to fix issue.
>>
>> Here is a quick look of the CorMut package:
>> https://gist.github.com/GuangchuangYu/91b3396c7e49ab42c565a9cda3c35e18.
>>
>> There should be more issues than I can found with quick look of the source
>> code.
>>
>> Best wishes,
>> Guangchuang
>>>
>
>
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