[Bioc-devel] Trying to clone my repo but my key is not recognized.

[Joris Meys]

Hi Martin,

my bad, should have given you that info immediately. Thank you for the
extensive info, turns out I registered only the key on my computer at home,
not here at work. Your info helped me register the other key as well. Thank
you again.

Cheers
Joris

On Tue, Aug 22, 2017 at 12:45 PM, Martin Morgan <
martin.morgan at roswellpark.org> wrote:

> On 08/22/2017 06:07 AM, Joris Meys wrote:
>
>> As said, this is what I got after
>>
>> git fetch upstream
>>
>> As per instructions here: http://bioconductor.org/develo
>> pers/how-to/git/maintain-github-bioc/ (I did carry out the previous
>> steps as well).
>>
>
> I guess I'm looking for more information, for instance you don't mention
> what package you're working with! The svn user formerly known as j.meys is
> associated with packages/unifiedWMWqPCR, and with the public key starting
> with
>
>   ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCoPGY+EOzCkrmxQ6CJS9r4PH...
>
> maybe you could confirm that the remote you've added is correct by
> reporting
>
>    git remote -a
>
> and that you can check out the repository directly
>
>   cd /tmp
>   git clone git at git.bioconductor.org:packages/unifiedWMWqPCR
>
> to confirm that the ssh key exchange is working correctly.
>
> A possible problem is that you have several ssh keys on your machine, and
> git is using the wrong one. On linux (what operating system are you on?)
> one could edit ~/.ssh/config to contain an entry like
>
>   Host git.bioconductor.org
>         IdentityFile ~/.ssh/id_rsa_corresponding_to_submitted_key.pub
>
> In a bash shell you can see the ssh exchange with
>
>   GIT_SSH_COMMAND="ssh -v" git pull
>
> which toward the top might indicate where it fails to find the correct ssh
> key.
>
> You can also use the form https://goo.gl/forms/97Cf3zFgyQwG76lw1 to
> submit additional ssh keys (1 per request); these requests are processed
> 'by hand' so involve a lag of about 24 hours.
>
> Martin
>
>
>
>
>> Cheers
>> Joris
>>
>>
>>
>>
>> On Tue, Aug 22, 2017 at 11:24 AM, Martin Morgan <
>> martin.morgan at roswellpark.org <mailto:martin.morgan at roswellpark.org>>
>> wrote:
>>
>>     On 08/22/2017 04:59 AM, Joris Meys wrote:
>>
>>         Hi,
>>
>>         I sent my public key as registered in my github account to you a
>>         while ago,
>>         but when I tried to clone my repository, I get the following
>>         error message
>>         after git fetch upstream:
>>
>>         -----
>>
>>         The authenticity of host 'git.bioconductor.org
>>         <http://git.bioconductor.org> (34.192.48.227)' can't be
>>         established.
>>         ECDSA key fingerprint is
>>         SHA256:nXILc5fVCnDfOID8HgPi+mSufGtr2JMYgnRa1JAQj/Q.
>>         Are you sure you want to continue connecting (yes/no)? yes
>>
>>         Warning: Permanently added 'git.bioconductor.org
>>         <http://git.bioconductor.org>,34.192.48.227' (ECDSA) to
>>
>>         the list of known hosts.
>>         Permission denied (publickey).
>>         fatal: Could not read from remote repository.
>>
>>         Please make sure you have the correct access rights and the
>>         repository
>>         exists.
>>
>>         -----
>>
>>         I've been googling and hurting my brain to figure out what I did
>>         wrong, but
>>         I honestly don't have a clue. Can anyone tell me how I can solve
>>         this?
>>
>>
>>     can you show the command that you are using to (try to) clone your
>>     repository?
>>
>>
>>
>>         Cheers
>>         Joris
>>
>>
>>
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>>
>>
>> --
>> Joris Meys
>> Statistical consultant
>>
>> Ghent University
>> Faculty of Bioscience Engineering
>> Department of Mathematical Modelling, Statistics and Bio-Informatics
>>
>> tel : +32 9 264 59 87
>> Joris.Meys at Ugent.be
>> -------------------------------
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>>
>
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-- 
Joris Meys
Statistical consultant

Ghent University
Faculty of Bioscience Engineering
Department of Mathematical Modelling, Statistics and Bio-Informatics

tel : +32 9 264 59 87
Joris.Meys at Ugent.be
-------------------------------
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php

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