[Bioc-devel] Trying to clone my repo but my key is not recognized.
Martin Morgan
martin.morgan at roswellpark.org
Tue Aug 22 12:45:33 CEST 2017
On 08/22/2017 06:07 AM, Joris Meys wrote:
> As said, this is what I got after
>
> git fetch upstream
>
> As per instructions here:
> http://bioconductor.org/developers/how-to/git/maintain-github-bioc/ (I
> did carry out the previous steps as well).
I guess I'm looking for more information, for instance you don't mention
what package you're working with! The svn user formerly known as j.meys
is associated with packages/unifiedWMWqPCR, and with the public key
starting with
ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCoPGY+EOzCkrmxQ6CJS9r4PH...
maybe you could confirm that the remote you've added is correct by reporting
git remote -a
and that you can check out the repository directly
cd /tmp
git clone git at git.bioconductor.org:packages/unifiedWMWqPCR
to confirm that the ssh key exchange is working correctly.
A possible problem is that you have several ssh keys on your machine,
and git is using the wrong one. On linux (what operating system are you
on?) one could edit ~/.ssh/config to contain an entry like
Host git.bioconductor.org
IdentityFile ~/.ssh/id_rsa_corresponding_to_submitted_key.pub
In a bash shell you can see the ssh exchange with
GIT_SSH_COMMAND="ssh -v" git pull
which toward the top might indicate where it fails to find the correct
ssh key.
You can also use the form https://goo.gl/forms/97Cf3zFgyQwG76lw1 to
submit additional ssh keys (1 per request); these requests are processed
'by hand' so involve a lag of about 24 hours.
Martin
>
> Cheers
> Joris
>
>
>
>
> On Tue, Aug 22, 2017 at 11:24 AM, Martin Morgan
> <martin.morgan at roswellpark.org <mailto:martin.morgan at roswellpark.org>>
> wrote:
>
> On 08/22/2017 04:59 AM, Joris Meys wrote:
>
> Hi,
>
> I sent my public key as registered in my github account to you a
> while ago,
> but when I tried to clone my repository, I get the following
> error message
> after git fetch upstream:
>
> -----
>
> The authenticity of host 'git.bioconductor.org
> <http://git.bioconductor.org> (34.192.48.227)' can't be
> established.
> ECDSA key fingerprint is
> SHA256:nXILc5fVCnDfOID8HgPi+mSufGtr2JMYgnRa1JAQj/Q.
> Are you sure you want to continue connecting (yes/no)? yes
>
> Warning: Permanently added 'git.bioconductor.org
> <http://git.bioconductor.org>,34.192.48.227' (ECDSA) to
> the list of known hosts.
> Permission denied (publickey).
> fatal: Could not read from remote repository.
>
> Please make sure you have the correct access rights and the
> repository
> exists.
>
> -----
>
> I've been googling and hurting my brain to figure out what I did
> wrong, but
> I honestly don't have a clue. Can anyone tell me how I can solve
> this?
>
>
> can you show the command that you are using to (try to) clone your
> repository?
>
>
>
> Cheers
> Joris
>
>
>
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>
>
> --
> Joris Meys
> Statistical consultant
>
> Ghent University
> Faculty of Bioscience Engineering
> Department of Mathematical Modelling, Statistics and Bio-Informatics
>
> tel : +32 9 264 59 87
> Joris.Meys at Ugent.be
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