[Bioc-devel] Git transition is happening August 16th.

[Martin Morgan]

On 08/18/2017 12:21 PM, Tiago Chedraoui Silva wrote:
> I had the same problem, which is described below:
> https://askubuntu.com/questions/144235/locale-variables-have-no-effect-in-remote-shell-perl-warning-setting-locale-f
> 
> I did the "Stop forwarding locale from the client" solution and it worked.

yes, but to solve this for other people generally can you tell me what 
you did to see the message? git clone 
git at git.bioconductor.org:pacakges/TCGAbiolinks ? git status ? ... ? Thanks
> 
> Best regards,
> Tiago Chedraoui Silva
> 
> On Fri, Aug 18, 2017 at 8:35 AM, Martin Morgan 
> <martin.morgan at roswellpark.org <mailto:martin.morgan at roswellpark.org>> 
> wrote:
> 
>     On 08/16/2017 08:45 PM, Charles Plessy wrote:
> 
>         Le Wed, Aug 16, 2017 at 08:30:22PM +0000, Turaga, Nitesh a écrit :
> 
> 
>             The Bioconductor git server is now alive!! All future
>             commits to Software and Data experiment packages should be
>             made to the git server.
> 
>             Please see the documentation on how to use the new server
>             https://www.bioconductor.org/developers/how-to/git/
>             <https://www.bioconductor.org/developers/how-to/git/>.
> 
>             If your package has been available through SVN remember to
>             submit your SSH keys to
>             https://goo.gl/forms/eg36vcBkIUjfZfLe2
>             <https://goo.gl/forms/eg36vcBkIUjfZfLe2>.
> 
>             NOTE: Workflow packages will remain on SVN for the moment.
> 
> 
>         Many thanks for this transition !
> 
>         I have a minor thing to report: when running "git pull" with a
>         non-C and non-US
>         locale, the remote server issues unimportant warning messages
>         from perl.
> 
>         perl: warning: Setting locale failed.
>         perl: warning: Please check that your locale settings:
>                  LANGUAGE = (unset),
>                  LC_ALL = (unset),
>                  LC_TIME = "en_GB.UTF-8",
>                  LC_MONETARY = "en_GB.UTF-8",
>                  LC_MEASUREMENT = "en_GB.UTF-8",
>                  LC_NUMERIC = "en_GB.UTF-8",
>                  LC_PAPER = "en_GB.UTF-8",
>                  LANG = "en_US.UTF-8"
>               are supported and installed on your system.
>         perl: warning: Falling back to a fallback locale ("en_US.UTF-8").
> 
>         Obviously, client-side LC_ALL=C suppresses this, but perhaps it
>         can be silenced
>         server-side, either by supporting many locales, or enforcing the
>         default C
>         locale without warning.
> 
> 
>     Hi Charles -- can you clarify a little what you are doing to get
>     this response? git clone git... ? or ??
> 
>     Thanks, Martin
> 
> 
> 
>         Have a nice day,
> 
>         Charles
> 
> 
> 
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> 
> 
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