[Bioc-devel] there is no package called 'zlibbioc' on WINDOWS

[Moritz Gerstung]

Hi Dan

Has this problem problem resurrected?

I see many packages depending on zlibbioc fail, including gage, Rhtslib and deepSNV.

http://bioconductor.org/checkResults/devel/bioc-LATEST/gage/moscato1-install.html

Cheers

Moritz


> On 1 Jun 2016, at 20:40, Dan Tenenbaum <dtenenba at fredhutch.org> wrote:
> 
> It's a problem on the server itself. It will not be present in today's build report which should be up in half an hour or so.
> 
> This is an intermittent problem, not a continuous one.
> 
> Dan
> 
> 
> ----- Original Message -----
>> From: "Hartley, Stephen (NIH/NHGRI) [F]" <stephen.hartley at nih.gov>
>> To: "Dan Tenenbaum" <dtenenba at fredhutch.org>, "Monther Alhamdoosh" <m.hamdoosh at gmail.com>, "bioc-devel"
>> <bioc-devel at r-project.org>
>> Sent: Wednesday, June 1, 2016 12:11:27 PM
>> Subject: RE: [Bioc-devel] there is no package called 'zlibbioc' on WINDOWS
> 
>> It looks like the zlibbioc package still won't load on moscato2. This is causing
>> something a ton of packages to fail at build (almost half?).
>> 
>> Does anyone have any idea what the issue is? Is it a problem with a patch to the
>> zlibbioc package, or a problem on the server itself?
>> 
>> -Steve
>> 
>> -----Original Message-----
>> From: Dan Tenenbaum [mailto:dtenenba at fredhutch.org]
>> Sent: Thursday, May 26, 2016 9:03 PM
>> To: Monther Alhamdoosh; bioc-devel at r-project.org
>> Subject: Re: [Bioc-devel] there is no package called 'zlibbioc' on WINDOWS
>> 
>> It's an as yet unknown problem with the build system. It's very likely that it
>> will resolve itself in tonight's builds.
>> 
>> Dan
>> 
>> 
>> On May 26, 2016 5:04:43 PM PDT, Monther Alhamdoosh <m.hamdoosh at gmail.com> wrote:
>>> Hi developers,
>>> 
>>> Our package named EGSEA seems to fail to be built on Windows as it
>>> depends on "gage" which depends on zlibbioc. The problem appears in the
>>> release branch and not in the devel branch.
>>> 
>>> Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck =
>>> vI[[i]])
>>> :
>>> 
>>> there is no package called 'zlibbioc'
>>> 
>>> ERROR: lazy loading failed for package 'gage'
>>> 
>>> Cheers,
>>> Monther
>>> 
>>> 	[[alternative HTML version deleted]]
>>> 
>>> _______________________________________________
>>> Bioc-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>> 
>> 	[[alternative HTML version deleted]]
>> 
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> 
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