[Bioc-devel] Question about InteractionSet package

Dan Tenenbaum dtenenba at fredhutch.org
Fri Oct 21 19:44:26 CEST 2016

You need to tell us the command that produced that error.

InteractionSet is a Bioconductor package, not a CRAN package. Maybe you tried to install it with install.packages() instead of biocLite()?

See the "Installlation" section of



----- Original Message -----
> From: "Ioannis Vardaxis" <ioannis.vardaxis at math.ntnu.no>
> To: "bioc-devel" <bioc-devel at r-project.org>
> Sent: Friday, October 21, 2016 7:07:30 AM
> Subject: [Bioc-devel] Question about InteractionSet package

> Hi,
> I am currently developing a package which I want to submit to Bioconductor. I am
> using the R-devel version. I am trying  to install the InteractionSet package
> with no success. I get the following warnings:
> Warning: unable to access index for repository
> https://cran.rstudio.com/bin/macosx/mavericks/contrib/3.4:
> Package which is only available in source form, and may need compilation of
> C/C++/Fortran:
>  'InteractionSet'
> Do you want to attempt to install these from sources?
> y/n:
> Even if I answer y, the package is not installed. Is there any possible solution
> to the problem?
> Best,
> Ioannis
> --
> Ioannis Vardaxis
> Stipendiat IMF
>	[[alternative HTML version deleted]]
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