[Bioc-devel] msPurity check failure on Windows

Martin Morgan martin.morgan at roswellpark.org
Thu Oct 13 14:57:33 CEST 2016

On 10/13/2016 08:17 AM, Thomas Lawson wrote:
> Hi all,
> Thanks for everybody who worked to get mzR to build and pass on Windows.
> The package msPurity, which relies on mzR, was building and passing all
> checks after the mzR updates but then unfortunately started failing on a
> unit test on the Windows server.
> The problem seems to be from when I call xcms::group in a unit test. The
> error message goes away on my local Windows machine when I load in the XCMS
> library as 'library(xcms)' rather than calling directly 'xcms::group' in
> the test script.
> I know we are well past the package deadline for this release, but I was
> just checking if there is perhaps a small chance of getting my package into
> the stable release (if it passes the CMD check on Windows by tomorrow)?

yes, your package will be included in the release.

But your approach sounds like a workaround rather than the right 
solution to the problem. What specifically was the error on Windows?


> Kind regards,
> Tom
> 	[[alternative HTML version deleted]]
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

This email message may contain legally privileged and/or...{{dropped:2}}

More information about the Bioc-devel mailing list