[Bioc-devel] namespace question

[Zhu, Lihua (Julie)]

Michael,

I have the same user case as Kasper. Another example is that both IRanges and hash packages have hash. I need to use the hash from the hash package instead of the one from IRanges.

Best,

Julie

On Mar 30, 2016, at 7:57 PM, Kasper Daniel Hansen <kasperdanielhansen at gmail.com<mailto:kasperdanielhansen at gmail.com>> wrote:

My usecase is when I import() two packages who has a conflict in a name.  For example, both Biobase and matrixStats has both anyMissing and rowMedians. I am happy to get all of these two packages, but I need to resolve the conflict.  Since I want to keep the ones from matrixStats I know need to figure out how to import Biobase selectively.  Which I can, using the tools from codetoolsBioC, but I would also be happy with an importFromExcept(), which would make my life much easier.

Best,
Kasper

On Wed, Mar 30, 2016 at 4:47 PM, Michael Lawrence <lawrence.michael at gene.com<mailto:lawrence.michael at gene.com>> wrote:
I'm curious about which symbols you wouldn't want to import, and why.

On Wed, Mar 30, 2016 at 12:19 PM, Zhu, Lihua (Julie)
<Julie.Zhu at umassmed.edu<mailto:Julie.Zhu at umassmed.edu>> wrote:
> Hi,
>
> Is there a function to import all the exported objects from a package except a few named ones in NAMESPACE file?
>
> For example, I would like to import all the functions in S4Vectors except fold. Is there a way to  specify this without listing all other functions using importFrom?
>
> Many thanks for your help!
>
> Best regards,
>
> Julie
>
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