[Bioc-devel] TIMEOUTs on Morelia

Dan Tenenbaum dtenenba at fredhutch.org
Mon Feb 1 19:11:54 CET 2016

I think the morelia server was overloaded, so it was restarted yesterday around 11PM Seattle time, so I hope we will see fewer TIMEOUTs in today's build report.

----- Original Message -----
> From: "Hartley, Stephen (NIH/NHGRI) [F]" <stephen.hartley at nih.gov>
> To: "bioc-devel" <bioc-devel at r-project.org>
> Sent: Monday, February 1, 2016 10:06:11 AM
> Subject: [Bioc-devel] TIMEOUTs on Morelia

> The current devel build for DESeq2 has status TIMEOUT on Morelia. This is odd
> since the package builder gives it 40 minutes to complete, and it finishes in
> less than 5 on zin2 and muscato2.
> A bunch of packages that depend on or suggest DESeq2 also timeout on Morelia:
> DiffBind, derfinder, DChIPRep, gage, phyloseq, rgsepd, systemPipeR, and TCC.
> All of them time out after 40 minutes, but take less than 10 minutes to build
> on zin2 and moscato2.
> So I guess the question is: is it DESeq2, or is something wrong with the Morelia
> server? I don't have an OSX-mavericks machine to test it all out on.
> Is there any way to get previous daily build reports, or are they deleted daily?
> -Steve
>	[[alternative HTML version deleted]]
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