[Bioc-devel] moving package from annotation to experiment data

[Kasper Daniel Hansen]

And I realized this since I am currently updating these packages in devel
following a change in minfi (where I move from eSet to SummarizedExperiment
without GRanges).

Best,
Kasper

On Fri, Dec 9, 2016 at 10:51 AM, Kasper Daniel Hansen <
kasperdanielhansen at gmail.com> wrote:

> It got added to the wrong repos.
>
> You'll see it matches the other
>   FlowSorted.XX.450k packages
> of which there are 3 experimental packages with different values of XX
> (Blood, CordBlood, DLPFC).  This is reference data for 450k experiments on
> sorted (isolated) cell types.  It is experimental data, but it is kind of
> used in a annotation-like manner, for example in the estimateCellTypes
> function in minfi where you basically take
>   own samples + reference data
> and get cell type composition estimates.  Since it is experiment data, I
> think the right place is the experiment data part of the repos (the
> packages are also big).
>
> Best,
> Kasper
>
> On Fri, Dec 9, 2016 at 10:48 AM, Obenchain, Valerie <Valerie.Obenchain@
> roswellpark.org> wrote:
>
>> Can you give me some background? Was this recently added or did it get
>> added to the wrong repo?
>>
>> Val
>>
>>
>> On 12/09/2016 07:42 AM, Kasper Daniel Hansen wrote:
>> > The package
>> >   FlowSorted.CordBloodNorway.450k
>> > should be moved from Annotation to ExperimentData.  Not sure how to do
>> this.
>> >
>> > Best,
>> > Kasper
>> >
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>> >
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