[Bioc-devel] How to update annotation packages

Robert Castelo robert.castelo at upf.edu
Wed Oct 15 18:08:59 CEST 2014


Hi,


i submitted one release ago the following annotation packages:

MafDb.ALL.wgs.phase1.release.v3.20101123 	
MafDb.ESP6500SI.V2.SSA137.dbSNP138
phastCons100way.UCSC.hg19

for which i'm also the "maintainer".

while the functionality to access their annotation resides in another 
software package i maintain (VariantFiltering), they contain some 
functionality to help updating their annotations themselves. i need to 
update those R scripts which are part of the annotation packages, 
however, i found nowhere whether this is possible via svn.

how should i proceed with this, should i made the changes local and 
submit the new version, or is there some 'svn' way to do it just like 
with software or experiment data packages?

thanks,

robert.



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