[Bioc-devel] commit changes to data packages

Dan Tenenbaum dtenenba at fhcrc.org
Wed Jul 11 18:21:48 CEST 2012


On Wed, Jul 11, 2012 at 3:30 AM, Laurent Gatto <laurent.gatto at gmail.com> wrote:
> Dear all,
>
> I have checked a complete working copy of a data package out, as
> described in [1]. After updating infrastructure files (DESCRIPTION and
> NEWS) and the actual data, svn status tells me the following
> ?       data
> M       DESCRIPTION
> M       NEWS
> ?       inst/extdata
>
> Should I 'svn add data inst/data' and then commit, as usual, or is
> there an alternative way to explicitly commit  data files to the
> external data_store separately?
>

Yes, cd to data and then do your commit there.
The svn status above seems to indicate that 'data' is not part of svn,
but actually it is. It is part of a different svn repository than your
current directory.

Dan



> Thank you in advance,
>
> Best wishes,
>
> Laurent
>
>
> [1] http://www.bioconductor.org/developers/source-control/
>
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