[Bioc-devel] Installation problem IsoGeneGUI for 64-bit pc
mtmorgan at fhcrc.org
Fri Jan 21 04:04:17 CET 2011
On 01/20/2011 06:26 PM, Setia PRAMANA wrote:
> Hi All,
> One of the reviewers of IsoGeneGUI got the error messages below. I have checked in the build/check site,
> http://bioconductor.org/checkResults/2.7/bioc-LATEST/#I there is no problem mention there.
> My self since I don’t have 64-bit pc right now, I couln't try it.
> Please let me know what may be the problem. Thank you in advance.
> Best regards,
> Installation attempt on a 64-bit PC, Windows 7 Pro, R 2.12.1
> • Got the following error messages:
> 1. Attempt to unzip IsoGeneGUI_1.2.1.zip
> Bad zip header found.
> ??? File fails CRC check:
> 2. Attempt to install package from R (Menu – Packages – Install from zip files)
> > utils:::menuInstallLocal()
> Error in gzfile(file, "r") : cannot open connection
> Warning messages:
> 1: In unzip(zipname, exdir = dest) :
> error 1 while unzipping
> 2: In gzfile(file, "r") :
> cannot open compressed file 'IsoGeneGUI/DESCRIPTION',
> probable reason 'No such file or directory'
The reviewer needs to follow the standard installation instructions at
and evaluate the commands
otherwise they will not get the dependencies. This also requires that
they have an appropriate version of R installed, e.g., R-2.12.1. The
error 1. (use unzip on the file) is not expected to work; 2. might be
expected to work but only if the reviewer has not made any mistakes. The
error 'cannot open connection' suggests that the reviewer has made a
> Bioc-devel at r-project.org mailing list
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109
Telephone: 206 667-2793
More information about the Bioc-devel