[Bioc-devel] updating an existing package via svn

Martin Morgan mtmorgan at fhcrc.org
Wed Sep 9 15:19:11 CEST 2009


Wolfgang Huber wrote:
> Maarten van Iterson ha scritto:
>> Dear BioC-developers,
>> I have created an improved version of my BioC-package (SIM) and want to
>> update this version to the devel of BioConductor. I'm not sure if I
>> just can replace the svn trunk on my computer with the
>> new version using the svn commands.
>>
>> Thanks in advance
>>
>> Maarten
>>
>>
> 
> 
> Maarten,
> 
> 1. use
> 
> svn checkout
> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SIM
> 
> (in one line) in a new directory to obtain what is currently in the
> Bioconductor repository
> 
> 2. Replace the files that you want to change; Use 'svn add' and 'svn rm'
> to add or remove files..
>
> 3. Use 'svn commit' to send the changes back to the Bioconductor server.
> 
> There are many good introductions to subversion on the internet and in
> bookstores. You could also ask someone locally in Leiden with some
> experience.

...including on the Bioconductor developer wiki 'how to' page

  http://wiki.fhcrc.org/bioc/HowTo

in case that's helpful.

Martin

> 
> 
> Best wishes
>      Wolfgang
> 
> -------------------------------------------------------
> Wolfgang Huber
> EMBL
> http://www.embl.de/research/units/genome_biology/huber
> 
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