[Bioc-devel] Error on pitt (Mac OS X Tiger (10.4.11) / i386)
zacher at lmb.uni-muenchen.de
zacher at lmb.uni-muenchen.de
Sat Sep 5 14:14:54 CEST 2009
Hello BioC-develers,
I just contributed my first package (Starr) to bioconductor.
I get an error on pitt (Mac OS X Tiger (10.4.11) / i386) at the
multiple platform build/check report (shown below).
On the other computers, no error occurs. As I don't use MAC
and the error only occurs on this machine, I have no idea how to
fix the problem. Is it a problem with the package, or with the machine?
Best regards
Benedikt
-----------------------------------------------------------
* checking for file 'Starr/DESCRIPTION' ... OK
* preparing 'Starr':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'Starr' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: RColorBrewer
Loading required package: limma
Loading required package: Matrix
Loading required package: lattice
Attaching package: 'Matrix'
The following object(s) are masked from package:base :
rcond
Loading required package: grid
** help
*** installing help indices
** building package indices ...
* DONE (Starr)
* creating vignettes ... ERROR
Loading required package: Ringo
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: RColorBrewer
Loading required package: limma
Loading required package: Matrix
Loading required package: lattice
Attaching package: 'Matrix'
The following object(s) are masked from package:base :
rcond
Loading required package: grid
Loading required package: affy
Loading required package: affxparser
Attaching package: 'Starr'
The following object(s) are masked from package:affy :
plotDensity
The following object(s) are masked from package:limma :
plotMA
Error: processing vignette 'Starr.Rnw' failed with diagnostics:
chunk 43 (label=plotProfiles)
Error in grid.Call.graphics("L_setviewport", pvp, TRUE) :
Non-finite location and/or size for viewport
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Execution halted
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