CAMML: Cell-Typing using Variance Adjusted Mahalanobis Distances with Multi-Labeling

Creates multi-label cell-types for single-cell RNA-sequencing data based on weighted VAM scoring of cell-type specific gene sets. Schiebout, Frost (2022) <>.

Version: 1.0.0
Depends: R (≥ 3.6.0)
Imports: VAM, Seurat (≥ 4.0.0), MASS, Matrix (≥ 1.3.3), utils, BiocManager,,,, AnnotationDbi, SeuratObject (≥ 4.0.0), methods, edgeR
Suggests: sctransform (≥ 0.3.2)
Published: 2023-11-13
DOI: 10.32614/CRAN.package.CAMML
Author: H. Robert Frost [aut], Courtney Schiebout ORCID iD [aut, cre]
Maintainer: Courtney Schiebout < at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
Copyright: Dartmouth College
NeedsCompilation: no
CRAN checks: CAMML results


Reference manual: CAMML.pdf
Vignettes: CAMML_FigureVignette


Package source: CAMML_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): CAMML_1.0.0.tgz, r-release (x86_64): CAMML_1.0.0.tgz, r-oldrel (x86_64): not available
Old sources: CAMML archive


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