BiocManager: Access the Bioconductor Project Package Repository

A convenient tool to install and update Bioconductor packages.

Version: 1.30.25
Imports: utils
Suggests: BiocVersion, BiocStyle, remotes, rmarkdown, testthat, withr, curl, knitr
Published: 2024-08-28
DOI: 10.32614/CRAN.package.BiocManager
Author: Martin Morgan ORCID iD [aut], Marcel Ramos ORCID iD [aut, cre]
Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>
BugReports: https://github.com/Bioconductor/BiocManager/issues
License: Artistic-2.0
URL: https://bioconductor.github.io/BiocManager/
NeedsCompilation: no
Materials: README NEWS
CRAN checks: BiocManager results

Documentation:

Reference manual: BiocManager.pdf
Vignettes: Installing and Managing Bioconductor Packages (source, R code)

Downloads:

Package source: BiocManager_1.30.25.tar.gz
Windows binaries: r-devel: BiocManager_1.30.25.zip, r-release: BiocManager_1.30.25.zip, r-oldrel: BiocManager_1.30.25.zip
macOS binaries: r-release (arm64): BiocManager_1.30.25.tgz, r-oldrel (arm64): BiocManager_1.30.25.tgz, r-release (x86_64): BiocManager_1.30.25.tgz, r-oldrel (x86_64): BiocManager_1.30.25.tgz
Old sources: BiocManager archive

Reverse dependencies:

Reverse depends: annaffy, Pirat
Reverse imports: affy, affylmGUI, AnnotationHub, AnnotationHubData, AnVIL, AnVILPublish, anyLib, aroma.core, BayesianPlatformDesignTimeTrend, BiocCheck, BiocPkgTools, BiocStyle, biocthis, biocViews, CALANGO, CAMML, ccmap, ChIPanalyser, Cogito, crisprVerse, CytoMethIC, EDASeq, EnrichmentBrowser, esATAC, EuPathDB, ExperimentHub, ExperimentHubData, FastUtils, flowGate, gcrma, gDRstyle, geneExpressionFromGEO, GenomicScores, ggm, GOTHiC, gpcp, HubPub, influential, iSEEhub, librarian, lipidomeR, mariner, mergen, MiRaGE, NMF, oligoClasses, OrganismDbi, pkgndep, rawDiag, RCPA, RforProteomics, riskmetric, rjtools, rvcheck, rworkflows, SCRIP, scTensor, seeker, SeqGate, SingleCellSignalR, tinyarray, umiAnalyzer, webbioc
Reverse suggests: alevinQC, AlphaMissenseR, AnnotationForge, autonomics, available, BatchQC, bbl, BeeBDC, BiocHubsShiny, BSgenome, bulkAnalyseR, CaDrA, CAEN, celda, celldex, cellmigRation, CEMiTool, ChemmineOB, ChemmineR, ChIPpeakAnno, circRNAprofiler, clusterProfiler, clustifyr, CNVScope, cola, concordexR, csaw, cypress, dearseq, deepdep, DESeq2, devtools, discourseGT, DMRScan, EasyCellType, ExpImage, famat, FGNet, FieldEffectCrc, gDRutils, GDSArray, genBaRcode, GeneSelectR, GenomicSuperSignature, ggsector, gmoviz, GOSemSim, goSorensen, GrafGen, HiCDOC, HMP16SData, HMP2Data, homosapienDEE2CellScore, ibawds, InPAS, InteractiveComplexHeatmap, KEGGlincs, koinar, LCMSQA, MAGAR, MAGeCKFlute, maGUI, manynet, mastR, mdp, metaseqR2, methylKit, MicrobiotaProcess, MiscMetabar, MOCHA, multiclassPairs, NADfinder, ObMiTi, orthGS, orthos, pacman, pathwayTMB, PCMBase, pcutils, pipeFrame, pkggraph, pliman, preciseTAD, Prostar, qsea, RAMClustR, RCAS, RcmdrPlugin.BiclustGUI, rebook, recount, recoup, RegEnrich, regionReport, renv, RepeatedHighDim, rGenomeTracksData, rgoslin, rGREAT, rhinotypeR, RNAseqData.HNRNPC.bam.chr14, rsconnect, Rvisdiff, SCBN, scoup, scRepertoire, scRNAseq, seqCAT, seqsetvis, sesame, SGCP, simona, simplifyEnrichment, sketchR, snapcount, spatialLIBD, spatzie, SpectralTAD, spiky, splatter, SRTsim, sSNAPPY, SUITOR, survcomp, switchr, SynMut, TcGSA, TENET.AnnotationHub, tidybulk, tidyHeatmap, tigre, TnT, tripr, updateme, VCFArray, wrswoR

Linking:

Please use the canonical form https://CRAN.R-project.org/package=BiocManager to link to this page.