Last updated on 2025-04-19 06:50:00 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| behavr | 13 | ||
| damr | 6 | 7 | |
| ggetho | 13 | ||
| scopr | 1 | 12 | |
| sleepr | 13 | ||
| zeitgebr | 6 | 7 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 6, OK: 7
Version: 0.3.7
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
link_dam_metadata.Rd: data.table
read_dam_file.Rd: behavr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, OK: 12
Version: 0.3.5
Check: tests
Result: ERROR
Running 'testthat.R' [189s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(scopr)
Loading required package: behavr
Loading required package: data.table
>
> test_check("scopr")
machine_name date time test
1 E_014 2016-01-25 21:36:04 1
2 E_014 2016-02-17 <NA> 2
3 E_029 2016-01-25 <NA> 3
[ FAIL 3 | WARN 3 | SKIP 1 | PASS 44 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-load_ethoscope.R:29:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-link_ethoscope_metadata_remote.R:14:3'): link_ethoscope_metadata_remote with date and machine name ──
Error in `value[[3L]](cond)`: Could not find index file: https://raw.githubusercontent.com/rethomics/scopr/master/inst/extdata/ethoscope_results/index.txt
Backtrace:
▆
1. └─scopr:::link_ethoscope_metadata_remote(...) at test-link_ethoscope_metadata_remote.R:14:3
2. └─scopr:::build_query(result_dir = remote_dir, query = query, index_file = index_file)
3. └─scopr::list_result_files(result_dir, index_file)
4. └─base::tryCatch(...)
5. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
7. └─value[[3L]](cond)
── Error ('test-link_ethoscope_metadata_remote.R:51:3'): parse_query with date, machine name, and ROIs ──
Error in `value[[3L]](cond)`: Could not find index file: https://raw.githubusercontent.com/rethomics/scopr/master/inst/extdata/ethoscope_results/index.txt
Backtrace:
▆
1. └─scopr:::link_ethoscope_metadata_remote(...) at test-link_ethoscope_metadata_remote.R:51:3
2. └─scopr:::build_query(result_dir = remote_dir, query = query, index_file = index_file)
3. └─scopr::list_result_files(result_dir, index_file)
4. └─base::tryCatch(...)
5. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
7. └─value[[3L]](cond)
── Error ('test-list_result_files.R:31:3'): list_result_files fails works with remote index? ──
Error in `value[[3L]](cond)`: Could not find index file: https://raw.githubusercontent.com/rethomics/scopr/master/inst/extdata/ethoscope_results/index.txt
Backtrace:
▆
1. └─scopr:::list_result_files(dir, index_file = "index.txt") at test-list_result_files.R:31:3
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
[ FAIL 3 | WARN 3 | SKIP 1 | PASS 44 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 6, OK: 7
Version: 0.3.5
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
periodogram.Rd: behavr
periodogram_methods.Rd: data.table
spectrogram.Rd: behavr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64