[R-sig-ME] No functions in the glmmADMB package?

[Ben Bolker]

  The inability to install the package from r-forge is because
(probably) I forgot to update the repository structure since R 3.4.x
came out (binary packages are organized by major R release).

  When you downloaded the .zip file how did you install it?  If it was
really "from source", that wouldn't work (but I would think
install.packages(<zip file>, repos=NULL) should work.

  Did you remember library(glmmADMB) ?

  What does help(package=glmmADMB) say?

  Also: at present I'd recommend glmmTMB (on CRAN) as a better (same
capabilities or more, very similar interface, faster, more stable,
better maintained going forward) over glmmADMB.

 cheers
   Ben Bolker


On 17-09-14 12:14 PM, Jack Thorley wrote:
> Hi all,
> 
> I have been trying to install the glmmADMB package in order to run a
> binomial GLMM with zero inflation. After following the various
> suggestions on http://glmmadmb.r-forge.r-project.org/, whichever
> repository I selected returned the same error concerning non-zero
> status. For example:
> 
>    -  install.packages("glmmADMB", repos = "http://R-Forge.R-project.org")
> 
>    -    Warning in install.packages :
>        running command '"C:/PROGRA~1/R/R-34~1.1/bin/x64/R" CMD INSTALL
> -l "C:\Users\jackt\Documents\R\win-library\3.4"
> C:\Users\jackt\AppData\Local\Temp\RtmpiYmfyc/downloaded_packages/glmmADMB_0.8.3.3.tar.gz'
> had status 65535
>        Warning in install.packages :
>        installation of package ‘glmmADMB’ had non-zero exit status
> 
> 
> I thought I had got around the issue by installing locally from source
> via the zip file https://r-forge.r-project.org/R/?group_id=847  [version
> 0.8.3.3], except I cannot run the glmmadmb function from the package, as
> it is not there.
> 
> Any suggestions to overcome these problems. I am running 3.4.1 on a
> windows 64-bit machine.
> 
> thanks in advance
> Jack
> 
> -------------------------
> 
> PhD Student
> Department of Zoology
> University of Cambridge
> 
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