[R-meta] Which method to compute 95% confidence intervals around individual effect sizes (standardized mean differences) ?
Viechtbauer, Wolfgang (SP)
wo||g@ng@v|echtb@uer @end|ng |rom m@@@tr|chtun|ver@|ty@n|
Sun May 23 19:06:01 CEST 2021
All three methods you listed should give you identical results.
>From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces using r-project.org] On
>Behalf Of Dakis-Yaoba OUEDRAOGO
>Sent: Tuesday, 18 May, 2021 17:00
>To: r-sig-meta-analysis using r-project.org
>Subject: [R-meta] Which method to compute 95% confidence intervals around
>individual effect sizes (standardized mean differences) ?
>I am gathering studies about effects of various chemicals on corals, and for every
>concentration of a chemical I computed the standardized mean differences for
>several outcomes. My final goal is to know for which maximal concentration of a
>chemical no significant effect is observed, and for which minimal concentration of
>a chemical a significant effect is observed.
>To get this I computed the 95% confidence intervals around the standardized mean
>differences to identify the effect sizes that are significantly/non significantly
>different from zero.
>I am quite confused about how to properly compute these condidence intervals. I
>could see 3 different types of CI :
>1/ 95% CI assuming a normal distribution
>data$cilow <- data$yi - sqrt(data$vi)*qnorm(0.05/2, lower.tail = FALSE)
>data$ciup <- data$yi + sqrt(data$vi)*qnorm(0.05/2, lower.tail = FALSE)
>2/ 95% Wald-type confidence intervals
>These are computed using the summary.escalc() function in metafor
>3/ The confidence intervals computed from a multi-level model rma.mv where a
>variance-covariance matrix V is specified to take into account that I have several
>concentrations compared to the same control (Correction of Gleser & Olkin, I
>followed the tutorial in
>to compute V)
>mod <- rma.mv(yi=yi, V=V, mods= ~1, random= ~1 | ID_case, data=data,
>With forest(mod) I can see the individual study 95%CI on the plot and I can get
>mod$yi - sqrt(mod$vi)*qnorm(0.05/2, lower.tail = FALSE)
>mod$yi + sqrt(mod$vi)*qnorm(0.05/2, lower.tail = FALSE)
>Because the method chosen to compute the 95% CI around the individual standardized
>mean differences will greatly influence the conclusions about the problematic
>chemical concentrations, I will greatly appreciate any help, comment or advise on
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