[R-meta] pvalues from rma

[Viechtbauer, Wolfgang (SP)]

Dear Philippe,

Please install the 'devel' version of metafor, then it will work.

Best,
Wolfgang 

>-----Original Message-----
>From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces using r-project.org] On
>Behalf Of Philippe Tadger
>Sent: Wednesday, 24 March, 2021 20:16
>To: r-sig-meta-analysis using r-project.org
>Subject: Re: [R-meta] pvalues from rma
>
>Dear group
>
>I would like to check how to obtain p-values form metafor::rma
>
>I'm trying to replicate the first lines of the code from:
>https://www.metafor-project.org/doku.php/tips:assembling_data_or
><https://www.metafor-project.org/doku.php/tips:assembling_data_or>
>
>library(metafor)
>dat.bcg <- dat.bcg[,c(2:7)]
>#dat.bcg
>dat1 <- escalc(measure="OR", ai=tpos, bi=tneg, ci=cpos, di=cneg,
>data=dat.bcg)
>#dat1
>res1 <- rma(yi, vi, data=dat1)
>#res1
>#predict(res1, transf=exp, digits=2)
>dat2 <- data.frame(summary(dat1))
>dat2[c("yi", "ci.lb", "ci.ub")] <- data.frame(summary(dat1,
>transf=exp))[c("yi", "ci.lb", "ci.ub")]
>*######################The previous step need to provide pval, but is
>not giving such outcome.**######################*
>
>names(dat2)[which(names(dat2) == "yi")] <- "or"
>dat2[,c("or","ci.lb","ci.ub","pval")] <-
>round(dat2[,c("or","ci.lb","ci.ub","pval")], 2)
>
>--
>Kind regards
>*Philippe Tadger*
>Statistician (Msc.). Orthopedic Manual Therapist (Mag.).
>Physical Therapist (Bsc.)
>+32498774742.