[R-SIG-Mac] upgraded to 4.5 (mac x86), errors

[peter dalgaard]

Works fine here.

Did you do something with your packages after installing?

Reason that I ask: A number of people have been shooting themselves in the foot by copying old package directories over new ones - including the non-CRAN system packages that update.packages() can't fix.

Or, if you have packages in a separate non-versioned library, then you may need update.packages(checkBuilt=TRUE). 

-pd 

> On 30 May 2025, at 23.00, Carl Witthoft <carl using witthoft.com> wrote:
> 
> I suspect this is something simple I forgot to update or delete, but:
> iMac x86 recently upgraded to 15.5 Sequoia.
> 
> I installed R 4.5 from CRAN.
> then tried to install the "gmp" library and:
> 
> Error: package or namespace load failed for ‘gmp’ in get(Info[i, 1], envir = env):
> lazy-load database '/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/gmp/R/gmp.rdb' is corrupt
> In addition: Warning message:
> In get(Info[i, 1], envir = env) :
>  internal error 1 in R_decompress1 with libdeflate
> 
> Then,
> library(ggplot2)
> Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
> unable to load shared object '/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/glue/libs/glue.so':
> dlopen(/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/glue/libs/glue.so, 0x0006): Library not loaded: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib
>  Referenced from: <E900C54A-FB6D-371D-B50B-512EB8D2F868> /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/glue/libs/glue.so
>  Reason: tried: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib' (no such file), '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib' (no such file), '/usr/local/lib/libR.dylib' (no such file), '/usr/lib/libR.dylib' (no such file, not in dy
> 
> So I need to clear something out that's pointing to the 4.4 paths.  But aged me forgets what that is.
> 
> 
> 
> 
> 
> -- 
> Carl Witthoft
> personal: carl using witthoft.com
> The Witthoft Group, Consulting
> https://witthoftgroup.weebly.com/
> 
> _______________________________________________
> R-SIG-Mac mailing list
> R-SIG-Mac using r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business SchoolSolbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd.mes using cbs.dk  Priv: PDalgd using gmail.com