[R-SIG-Mac] R 4.3.1 fails on Mac OS X Sonoma

Brandon Hurr br@ndon@hurr @end|ng |rom gm@||@com
Tue Oct 3 20:08:20 CEST 2023


I can confirm that the behavior is the same on an Intel machine
freshly upgraded to Sonoma with R 4.3.0 R.app GUI 1.79 (8238)
aarch64-apple-darwin20
And it has been going on my M2 MBP R4.3.1 R.app GUI 1.79 (8238)
aarch64-apple-darwin20

Does the team need any debug outputs or similar to understand the
issue? Happy to send what's needed. Please advise.

HTH,
Brandon

On Tue, Oct 3, 2023 at 12:35 PM John Helly via R-SIG-Mac
<r-sig-mac using r-project.org> wrote:
>
> Aloha.
>
> I've confirmed it on the M-chip but afraid to test on my Intel.  I have
> had a problem for years now, that seems related and limited to R.app.
> RStudio does not have the problem: which is why I stopped using R.app.
>
> On multiple machines, all architectures, R.app spontaneously switches
> from editor windows to console and the switching of focus causes code to
> get damaged or destroyed unwittingly.
>
> RStudio has its own problems but this problem has never been solved (for
> me) and I haven't been able to confirm it with others so no known
> cause.  It may be related to this current problem since it seems to be
> in the same general domain.
>
> J.
>
> On 10/3/23 06:27, Kevin Thorpe wrote:
> > Hello.
> >
> > I am wondering if this is just an issue on M1/2 chips or does it also affect Intel?
> >
> > I usually hold off upgrading until the first or second patch, but I feel I should warn students in my class.
> >
> > Kevin
> >
> >
> >> On Oct 3, 2023, at 12:14 PM, William R Revelle <revelle using northwestern.edu> wrote:
> >>
> >> [You don't often get email from revelle using northwestern.edu. Learn why this is important at https://aka.ms/LearnAboutSenderIdentification ]
> >>
> >> It turns out that is not just the graphics window that the focus problem, it is all windows.  That is, opening the help window takes focus away from the console and help needs to be closed before the console window will be active.  The install package window has the same problem.
> >>
> >> For each case, closing the extra window restores console functioning.
> >>
> >> I report this just so Simon can see the report.
> >>
> >> I remain in awe of the work of Simon in getting the Mac version to work so well.
> >>
> >> I am running
> >>
> >> R version 4.3.1 Patched (2023-09-30 r85239)
> >> Platform: aarch64-apple-darwin20 (64-bit)
> >> Running under: macOS Sonoma 14.0
> >>
> >> Bill
> >>
> >>
> >>> On Oct 1, 2023, at 12:13 PM, Sparapani, Rodney <rsparapa using mcw.edu> wrote:
> >>>
> >>> I hear you!  It is not just R either.  I know you mentioned R-studio.
> >>> But there are lots of other things R-related like emacs.  I had the
> >>> hardest time with emacs for Catalina and Big sur.  I’m not sure
> >>> but I think Monterrey was better.  However, all of those issues
> >>> finally went away with Ventura.  This makes me extremely hesitant for Sonoma
> >>> since I am finally happy now.  So long story short: Apple gets there,
> >>> but it can take years sometimes.  The new hardware like ARM (and
> >>> the titanium iPhone!) look so cool it can be very tempting to go
> >>> bleeding-edge. I learned my lesson when Ventura first came out.
> >>> R was not ready and neither were lots of tools that we use here
> >>> at work.  Good luck
> >>> --
> >>> Rodney Sparapani, Associate Professor of Biostatistics, He/Him/His
> >>> Vice President, Wisconsin Chapter of the American Statistical Association
> >>> Institute for Health and Equity, Division of Biostatistics
> >>> Medical College of Wisconsin, Milwaukee Campus
> >>> From: William Revelle <lists using revelle.net>
> >>> Date: Sunday, October 1, 2023 at 12:01 PM
> >>> To: Sparapani, Rodney <rsparapa using mcw.edu>, r-sig-mac using r-project.org <r-sig-mac using r-project.org>
> >>> Subject: Re: [R-SIG-Mac] R 4.3.1 fails on Mac OS X Sonoma
> >>> ATTENTION: This email originated from a sender outside of MCW. Use caution when clicking on links or opening attachments.
> >>> ________________________________
> >>>
> >>> Rodney,
> >>>
> >>> Thanks for your quick reply.
> >>>
> >>> It turns out this is just a problem with the base R  for Mac graphics window (which is to say, the version I like).  I can still use R-studio (which I don’t like as much).
> >>>
> >>> I can wait patiently for a patch to the Mac version while using R-Studio.
> >>>
> >>> That way I don’t have to go through the hassle of trying to reinstall 13.x and dumping 14.0.
> >>>
> >>> Bill
> >>>
> >>>
> >>>> On Oct 1, 2023, at 11:22 AM, Sparapani, Rodney <rsparapa using mcw.edu> wrote:
> >>>>
> >>>> Hi Bill:
> >>>> Well, I am usually pretty cautious about this.  I don’t move to the
> >>>> next release until R is ready.  For Ventura, it took quite awhile
> >>>> before that happened.  Sorry
> >>>> --
> >>>> Rodney Sparapani, Associate Professor of Biostatistics, He/Him/His
> >>>> Vice President, Wisconsin Chapter of the American Statistical Association
> >>>> Institute for Health and Equity, Division of Biostatistics
> >>>> Medical College of Wisconsin, Milwaukee Campus
> >>>> From: R-SIG-Mac <r-sig-mac-bounces using r-project.org> on behalf of William Revelle <lists using revelle.net>
> >>>> Date: Sunday, October 1, 2023 at 11:19 AM
> >>>> To: r-sig-mac using r-project.org <r-sig-mac using r-project.org>
> >>>> Subject: [R-SIG-Mac] R 4.3.1 fails on Mac OS 1
> >>>> ATTENTION: This email originated from a sender outside of MCW. Use caution when clicking on links or opening attachments.
> >>>> ________________________________
> >>>>
> >>>> Dear Mac users of R and developers.
> >>>>
> >>>>
> >>>> I recently updated to the Sonoma OS for Mac  (14.0)  and it has a serious problem for graphics.
> >>>>
> >>>> plot(1:10) creates a graphic window but I can not switch back to the console window using either command-1 or the mouse.
> >>>>
> >>>> Anybody else having this problem?  Any suggestions for a patch?
> >>>>
> >>>> I am running a MacBook Pro with M1 Max.
> >>>>
> >>>> Bill
> >>>>
> >>>>
> >>>> (resent because of bad mail address)
> >>>> William Revelle            personality-project.org/revelle.html
> >>>> Professor                    personality-project.org
> >>>> Department of Psychology         https://urldefense.com/v3/__http://www.wcas.northwestern.edu/psych/__;!!H8mHWRdzp34!6ejyrhAkkZDmz7rI2sf4kna51unncXyvnIMc9xJ12h6pMfylTwNR8QeWq8RTUAAR7NMYOzH5OX_pOA$
> >>>> Northwestern University            https://urldefense.com/v3/__http://www.northwestern.edu/__;!!H8mHWRdzp34!6ejyrhAkkZDmz7rI2sf4kna51unncXyvnIMc9xJ12h6pMfylTwNR8QeWq8RTUAAR7NMYOzE95PXdSw$
> >>>> Use R for psychology                 personality-project.org/r
> >>>> It is 90 seconds to midnight    https://urldefense.com/v3/__http://www.thebulletin.org__;!!H8mHWRdzp34!6ejyrhAkkZDmz7rI2sf4kna51unncXyvnIMc9xJ12h6pMfylTwNR8QeWq8RTUAAR7NMYOzFQyyeCDA$
> >>>>
> >>>> _______________________________________________
> >>>> R-SIG-Mac mailing list
> >>>> R-SIG-Mac using r-project.org
> >>>> https://urldefense.com/v3/__https://stat.ethz.ch/mailman/listinfo/r-sig-mac__;!!H8mHWRdzp34!6ejyrhAkkZDmz7rI2sf4kna51unncXyvnIMc9xJ12h6pMfylTwNR8QeWq8RTUAAR7NMYOzHD4ZY2UQ$
> >>>
> >>> William Revelle            personality-project.org/revelle.html
> >>> Professor                    personality-project.org
> >>> Department of Psychology         https://urldefense.com/v3/__http://www.wcas.northwestern.edu/psych/__;!!H8mHWRdzp34!88tilf5jXzIUAFnhvoS-ukTdaw-8-r6Idnya5ElJTuSaQGzC-w32dWd-UDOpOs8l5fIqHIBhQrcuaw$
> >>> Northwestern University            https://urldefense.com/v3/__http://www.northwestern.edu/__;!!H8mHWRdzp34!88tilf5jXzIUAFnhvoS-ukTdaw-8-r6Idnya5ElJTuSaQGzC-w32dWd-UDOpOs8l5fIqHIB9JLDoKg$
> >>> Use R for psychology                 personality-project.org/r
> >>> It is 90 seconds to midnight    https://urldefense.com/v3/__http://www.thebulletin.org__;!!H8mHWRdzp34!88tilf5jXzIUAFnhvoS-ukTdaw-8-r6Idnya5ElJTuSaQGzC-w32dWd-UDOpOs8l5fIqHIB-u6-uTg$
> >>
> >> William Revelle                    personality-project.org/revelle.html
> >> Professor                                          personality-project.org
> >> Department of Psychology         www.wcas.northwestern.edu/psych/
> >> Northwestern University            www.northwestern.edu/
> >> Use R for psychology                 personality-project.org/r
> >> It 90 seconds to midnight          www.thebulletin.org
> >>
> >>
> >> _______________________________________________
> >> R-SIG-Mac mailing list
> >> R-SIG-Mac using r-project.org
> >> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> >
> > _______________________________________________
> > R-SIG-Mac mailing list
> > R-SIG-Mac using r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
> --
> John Helly / San Diego Supercomputer Center / Scripps Institution of Oceanography
> https://www.sdsc.edu/~hellyj / 808 205 9882 / 760 8408660
>
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