[R-SIG-Mac] R.app GUI 1.71 (7827) crashes on Catalina

[Bob Rudis]

Suggestion: try adding R.app to "Full Disk Access" in the Privacy tab
under Security & Privacy system preferences.

I'm not experiencing these issues (just now when I tried it; I
generally don't use R.app)

On Fri, May 1, 2020 at 4:54 PM Brandon Hurr <brandon.hurr using gmail.com> wrote:
>
> I'm going to add to the pile on this one. It's hard to nail down
> though. I was able to load Hiroshi's test.R script after loading up
> R-GUI 7827 and just now 7832. I loaded it from multiple directories by
> clicking on it.
> That said, I've been having many issues locking up R-GUI on my 2019
> MBAir since upgrading to R4.0.0. I can click and load R-GUI with a
> script file, but if I want to load another script it gives me the
> colored pinwheel of death. Sometimes it will load up R-GUI, but then
> pinwheel of death on loading a lengthy script. I'm not sure the length
> is the issue.
>
> I played around with the console a bit and noticed these messages pop
> up when it locks up R:
> error    13:49:54.173449-0700    kernel    Sandbox: garcon(763)
> deny(1) file-read-xattr /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data
> standardisation/Database Converts/Conversion script DEV.R
> error    13:49:54.243397-0700    kernel    Sandbox: garcon(763)
> deny(1) file-read-xattr /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data
> standardisation/Database Converts
> error    13:49:54.312989-0700    kernel    Sandbox: garcon(763)
> deny(1) file-read-xattr /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data
> standardisation
> error    13:49:54.344345-0700    kernel    Sandbox: garcon(763)
> deny(1) file-read-xattr /Users/brandonhurr/Dropbox (BioLumic Ltd)
>
> A rough guess here is that the sandboxing isn't working right (or is?)
> and is blocking access of R-GUI to the file which then locks up
> because it's waiting for data?
>
> Anyone else seeing this behavior and have a better idea how to pin it down?
>
> Thanks,
> B
>
>
> On Thu, Apr 30, 2020 at 6:07 AM Hiroshi Hakoyama
> <hiroshi-hakoyama using nagano.ac.jp> wrote:
> >
> > Dear All,
> >
> > Environment:
> > R version 4.0.0 (2020-04-24) -- "Arbor Day"
> > [R.app GUI 1.71 (7827) x86_64-apple-darwin17.0]
> > macOS: Mojave and Catalina
> > Removed file for the test: .Rapp.history
> >
> > Description:
> > R.app crashes when a large file (e.g., test.R) is double-clicked on Mojave and Catalina. The crash does not occur on High Sierra. Small source files (e.g., test2.R) do not cause the crash on Mojave and Catalina.
> >
> > How-To-Repeat:
> > Double-click test.R (or open test.R using R.app) on Catalina or Mojave.
> >
> > Fix:
> > unknown
> >
> > Crash Report is too large to paste to the email.
> >
> >
> > Best regards,
> >
> > Hiroshi Hakoyama
> > Nagano University
> >
> > test.R
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > ###############################################################################
> > x <- rnorm(100000)
> > y <- rnorm(100000)
> > hist(x)
> > hist(y)
> >
> > test2.R
> > x <- rnorm(100000)
> > y <- rnorm(100000)
> > hist(x)
> > hist(y)
> >
> > system.log
> > Apr 30 20:54:40 ec7 R[1147]: assertion failed: 19E287: libxpc.dylib + 92807 [32B0E31E-9DA3-328B-A962-BC9591B93537]: 0x89
> > _______________________________________________
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> > R-SIG-Mac using r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
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