[R-SIG-Mac] loading tkrplot causes a segfault

[THIOULOUSE JEAN]

Re-install X11 XQuartz (I think that this is in the FAQ).

Jean


> Le 11 juil. 2015 à 00:54, Dan Tenenbaum <dtenenba at fredhutch.org> a écrit :
> 
> Hi,
> 
> loading the tkrplot package (version 0.0-23) causes a segfault. This only seems to happen on Mavericks, not Snow Leopard, Linux, or Windows. 
> 
>> library(tkrplot)
> Loading required package: tcltk
> 
> *** caught segfault ***
> address 0x998, cause 'memory not mapped'
> 
> Traceback:
> 1: structure(.External(.C_dotTclObjv, objv), class = "tclObj")
> 2: .Tcl.objv(.Tcl.args.objv(...))
> 3: tcl("load", file, "Rplot")
> 4: doTryCatch(return(expr), name, parentenv, handler)
> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 6: tryCatchList(expr, classes, parentenv, handlers)
> 7: tryCatch(tcl("load", file, "Rplot"), error = function(e) warning("loading Rplot failed",     call. = FALSE))
> 8: fun(libname, pkgname)
> 9: doTryCatch(return(expr), name, parentenv, handler)
> 10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 11: tryCatchList(expr, classes, parentenv, handlers)
> 12: tryCatch(fun(libname, pkgname), error = identity)
> 13: runHook(".onLoad", env, package.lib, package)
> 14: loadNamespace(package, c(which.lib.loc, lib.loc))
> 15: doTryCatch(return(expr), name, parentenv, handler)
> 16: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 17: tryCatchList(expr, classes, parentenv, handlers)
> 18: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))             call <- sys.call(-4L)        dcall <- deparse(call)[1L]        prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <- conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],                 type = "b")        if (w > LONG)             prefix <- paste0(prefix, "\n  ")    }    else prefix <- "Error : "    msg <- paste0(prefix, conditionMessage(e), "\n")    .Internal(seterrmessage(msg[1L]))    if (!silent && identical(getOption("show.error.messages"),         TRUE)) {        cat(msg, file = stderr())        .Internal(printDeferredWarnings())    }    invisible(structure(msg, class = "try-error", condition = e))})
> 19: try({    ns <- loadNamespace(package, c(which.lib.loc, lib.loc))    env <- attachNamespace(ns, pos = pos, deps)})
> 20: library(tkrplot)
> 
> Possible actions:
> 1: abort (with core dump, if enabled)
> 2: normal R exit
> 3: exit R without saving workspace
> 4: exit R saving workspace
> 
> 
> 
> My sessionInfo() is:
> 
>> sessionInfo()
> R version 3.2.1 (2015-06-18)
> Platform: x86_64-apple-darwin13.4.0 (64-bit)
> Running under: OS X 10.9.5 (Mavericks)
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base     
> 
> 
> Any ideas?
> 
> Thanks,
> Dan
> 
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> R-SIG-Mac at r-project.org
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