[R-SIG-Mac] [R-sig-mac] Hmisc installed but won't load

Don McKenzie dmck at u.washington.edu
Mon Mar 24 20:35:38 CET 2014


My apologies if this has been addressed recently. Searching the archive and google brought me only to older posts.

I’m not understanding the error message below when I try to load Hmisc. I reinstalled it using the syntax suggested by Simon in an earlier post. I am using the vanilla R GUI ("R 3.0.3 GUI 1.63 Snow Leopard build (6660)”) on OSX 10.9.2.

Thanks in advance.


> install.packages("Hmisc",,"http://cran.r-project.org")
trying URL 'http://cran.r-project.org/bin/macosx/contrib/3.0/Hmisc_3.14-3.tgz'
Content type 'application/x-gzip' length 1555868 bytes (1.5 Mb)
opened URL
==================================================
downloaded 1.5 Mb

The downloaded binary packages are in
	/var/folders/d1/r1hsc_s91pg18v_t23bq27tw0000gn/T//RtmpIPxtRG/downloaded_packages



> library("Hmisc")
Error in gzfile(file, "rb") : cannot open the connection     *****************
In addition: Warning message:
In gzfile(file, "rb") :
  cannot open compressed file '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/latticeExtra/data/Rdata.rdx', probable reason 'No such file or directory'
Error: package or namespace load failed for ‘Hmisc’



> installed.packages()
.
.
.
Hmisc         "Hmisc"         "/Library/Frameworks/R.framework/Versions/3.0/Resources/library" "3.14-3”     NA
.
.
.


> sessionInfo()
R version 3.0.3 (2014-03-06)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] splines   grid      stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] Formula_1.1-1   survival_2.37-7 lattice_0.20-27 lavaan_0.5-15   MASS_7.3-29     plspm_0.4.1     turner_0.1.7    tester_0.1.7    diagram_1.6.2   shape_1.4.1     amap_0.8-12    

loaded via a namespace (and not attached):
[1] mnormt_1.4-7       pbivnorm_0.5-1     quadprog_1.5-5     RColorBrewer_1.0-5 stats4_3.0.3       tools_3.0.3 




Don McKenzie
Research Ecologist
Pacific Wildland Fire Sciences Lab
US Forest Service

Affiliate Professor
School of Environmental and Forest Sciences
University of Washington
dmck at uw.edu



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