[R-SIG-Mac] Building from source problems.
Rolf Turner
r.turner at auckland.ac.nz
Thu Oct 29 22:55:22 CET 2009
On 30/10/2009, at 10:25 AM, Simon Urbanek wrote:
> Rolf,
<snip>
>> But I still worry about the impact of setting ``No proxy''.
>>
>> An IT person is coming by this arvo to help me out with
>> this --- maybe things will be OK. So far I have observed
>> no ill effects.
>>
>
> As Brian said, apparently there is a setting in Firefox that allows
> you to keep the proxy for external connection and use direct access to
> localhost (R help).
Yeah, I didn't/don't understand that, since I don't understand
what ``proxies'' are. I'm just hammering and hoping. P'raps
the IT person who will come by this arvo will be able to help
me get this straight. I shall discuss Prof. Ripley's advice
with her.
>> (b) Building the spatstat package from source. I'd ***really***
>> like to be able to do this. I participate to some extent in
>> the development of spatstat. I get that funny error from
>> gcc in respect of that ``mtune=core2'' flag which brings it all
>> to a halt.
>
> The reason why I said your should get the CRAN release of 2.10 is
> exactly because that binary doesn't use the core2 optimization flags
> (you still have the issue of having old tools so it may break
> elsewhere -- so that may or may not ease your woes ...).
OK. I'll get the CRAN release. I'd still like to fix up the
old tools issue, but.
>>> As for your woes - I suspect you have outdated Xcode tools, but
>>> unfortunately you appear to not have read my e-mail so I can only
>>> speculate.
>>
>> I ***did*** read your email, mate! (Just to prove how
>> evilly the fates are out to get me, I searched high and
>> low for that email, through all my saved emails and all
>> the deleted emails --- which are actually kept around in
>> the ``Trash'' --- and couldn't find it. I did manage to
>> find my reply, which quoted from it.)
>>
>> I gather that what you're referring to is the sentence
>> ``Without further details on the tools you installed, exact
>> OS version and the like there is not much we can help with.''
>>
>> Well, I gave my session info, and told you my OS (Mac OS X
>> 10.4.11). But I'm afraid I ***don't know*** ``the tools I
>> installed''.
>
> Ok, so say so and I'll tell you how to find out :) -- the easiest is
> to click on
> /Developer/Applications/Xcode.app
> and see which version it is. Or, even better, just read
> http://r.research.att.com/tools/
> (the FAQ says the same thing about the tools you need but ... :P)
Did that. 'Mazing what I can do, once I know how! :-)
It says version 2.5. So, from what you said later in your
email,
- search for Xcode
2.5 - download and install.
would seem to be up to date.
>
> But back to your problem -- in order to support the optimizations (-
> mtune=core2) you want to switch to gcc-4.2 -- you can do that by
> typing "sudo gcc_select 4.2" in a Terminal window.
I gave that a go just now, and it said:
> The following is missing from your gcc 4.2 compiler installation.
> Reinstall the 4.2 compiler, or use another release.
> /usr/bin/gcc-4.2
> /usr/bin/g++-4.2
> /usr/include/gcc/darwin/4.2/stdint.h
> /usr/include/gcc/darwin/4.2/
So I need to update my gcc. But the FAQ says, in respect of
C/C++ compiler (section 2.1.1) that I should download Xcode
from http://developer.apple.com/tools/xcode/.
And if my current Xcode (version 2.5) is uptodate, that won't
make a difference, will it? I'm puzzled.
Well, I'm going to have a try at downloading the latest Xcode
from the Apple site and see if that helps.
Thanks for all your assistance. I may well be bugging you
again soon, I'm afraid.
cheers,
Rolf
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