[R-SIG-Mac] package installation issues

[Simon Urbanek]

64-bit GMP is now on the CRAN machine and I have re-compiled igraph so  
it should be fine (install from r.urbanek.info or wait for CRAN to  
synchronize). I'm checking other packages that may depend on GMP as  
well and will update them when seen.

Thanks,
Simon


On Nov 24, 2009, at 8:49 PM, Simon Urbanek wrote:

> Ok, I found the problem -- it's GMP. We have only 32-bit GMP on the  
> build machine so igraph is trying to use it but doesn't get it for  
> 64-bit. So this is really not related to the Fortran issue after  
> all. I'll put 64-bit GMP on the CRAN machine tomorrow and keep you  
> posted. If you don't need 64-bit just use 32-bit R in the meantime  
> (R --arch i386) -- that will work.
>
> Thanks,
> Simon
>
>
>
> On Nov 24, 2009, at 6:37 PM, Simon Urbanek wrote:
>
>>
>> On Nov 24, 2009, at 5:34 PM, Michael Barnett wrote:
>>
>>> Simon -
>>>
>>> I appreciate your help very much. Unfortunately I did exactly what  
>>> you said and got an error again :(
>>>
>>
>> Ooops -- I'll need to have a look - it is an issue in the 64-bit  
>> binary (I was checking 32-bit and that was fine) .. I'll keep you  
>> posted. In the meantime you can try
>>
>> install.packages("igraph",type='source')
>>
>> Thanks,
>> Simon
>>
>>
>>
>>
>>> ******snip******
>>> > install.packages("igraph",,"http://r.urbanek.info")
>>> trying URL 'http://r.urbanek.info/bin/macosx/leopard/contrib/2.10/ 
>>> igraph_0.5.3.tgz'
>>> Content type 'application/x-tar' length 3280864 bytes (3.1 Mb)
>>> opened URL
>>> ==================================================
>>> downloaded 3.1 Mb
>>>
>>>
>>> The downloaded packages are in
>>> 	/var/folders/7J/7JpbFNySGACoH3teAShOLE+++TM/-Tmp-//RtmptZ63yS/ 
>>> downloaded_packages
>>>
>>> > library("igraph")
>>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>> unable to load shared library '/Library/Frameworks/R.framework/ 
>>> Resources/library/igraph/libs/x86_64/igraph.so':
>>> dlopen(/Library/Frameworks/R.framework/Resources/library/igraph/ 
>>> libs/x86_64/igraph.so, 10): Symbol not found: ___gmpz_clear
>>> Referenced from: /Library/Frameworks/R.framework/Resources/library/ 
>>> igraph/libs/x86_64/igraph.so
>>> Expected in: dynamic lookup
>>>
>>> Error : .onLoad failed in 'loadNamespace' for 'igraph'
>>> Error: package/namespace load failed for 'igraph'
>>>
>>> *********
>>>
>>> -Michael
>>>
>>> On Nov 24, 2009, at 4:57 PM, Simon Urbanek wrote:
>>>
>>>> install.packages("igraph",,"http://r.urbanek.info")
>>>
>>
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