[R-SIG-Mac] package installation issues

Simon Urbanek simon.urbanek at r-project.org
Wed Nov 25 02:49:18 CET 2009


Ok, I found the problem -- it's GMP. We have only 32-bit GMP on the  
build machine so igraph is trying to use it but doesn't get it for 64- 
bit. So this is really not related to the Fortran issue after all.  
I'll put 64-bit GMP on the CRAN machine tomorrow and keep you posted.  
If you don't need 64-bit just use 32-bit R in the meantime (R --arch  
i386) -- that will work.

Thanks,
Simon



On Nov 24, 2009, at 6:37 PM, Simon Urbanek wrote:

>
> On Nov 24, 2009, at 5:34 PM, Michael Barnett wrote:
>
>> Simon -
>>
>> I appreciate your help very much. Unfortunately I did exactly what  
>> you said and got an error again :(
>>
>
> Ooops -- I'll need to have a look - it is an issue in the 64-bit  
> binary (I was checking 32-bit and that was fine) .. I'll keep you  
> posted. In the meantime you can try
>
> install.packages("igraph",type='source')
>
> Thanks,
> Simon
>
>
>
>
>> ******snip******
>> > install.packages("igraph",,"http://r.urbanek.info")
>> trying URL 'http://r.urbanek.info/bin/macosx/leopard/contrib/2.10/ 
>> igraph_0.5.3.tgz'
>> Content type 'application/x-tar' length 3280864 bytes (3.1 Mb)
>> opened URL
>> ==================================================
>> downloaded 3.1 Mb
>>
>>
>> The downloaded packages are in
>> 	/var/folders/7J/7JpbFNySGACoH3teAShOLE+++TM/-Tmp-//RtmptZ63yS/ 
>> downloaded_packages
>>
>> > library("igraph")
>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>  unable to load shared library '/Library/Frameworks/R.framework/ 
>> Resources/library/igraph/libs/x86_64/igraph.so':
>>  dlopen(/Library/Frameworks/R.framework/Resources/library/igraph/ 
>> libs/x86_64/igraph.so, 10): Symbol not found: ___gmpz_clear
>>  Referenced from: /Library/Frameworks/R.framework/Resources/library/ 
>> igraph/libs/x86_64/igraph.so
>>  Expected in: dynamic lookup
>>
>> Error : .onLoad failed in 'loadNamespace' for 'igraph'
>> Error: package/namespace load failed for 'igraph'
>>
>> *********
>>
>> -Michael
>>
>> On Nov 24, 2009, at 4:57 PM, Simon Urbanek wrote:
>>
>>> install.packages("igraph",,"http://r.urbanek.info")
>>
>
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