[R-SIG-Mac] Some trouble installing RPVM

elw at stderr.org elw at stderr.org
Thu Jul 26 14:26:27 CEST 2007




there are flags to tell R CMD build/install where to find headers and 
libraries.  you will need them, as your headers and libs are in 
nonstandard locations.  PVM_ROOT is insufficient.

--e



On Thu, 26 Jul 2007, Naji wrote:

> Date: Thu, 26 Jul 2007 13:55:18 +0200
> From: Naji <nassar at noos.fr>
> To: r-sig-mac at stat.math.ethz.ch
> Subject: [R-SIG-Mac] Some trouble installing RPVM
> 
> Hi...
>
>
>
> I downloaded RPVM sources from CRAN.. Ive encountered a lot a error
> messages..
> Thanks for your help
>
> WARNING: ignoring environment value of R_HOME
> * Installing *source* package 'rpvm' ...
> checking for gcc... gcc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ANSI C... none needed
> Check if PVM_ROOT is defined... no
> Warning: PVM_ROOT not defined.
> I'll try to build rpvm but you need set PVM_ROOT
> before use pvm. See pvm_intro(1PVM)
>
> Try to guess if pvm is installed somewhere ...
> Found pvm: /Users/najinassar/pvm3
> PVM_ROOT is /Users/najinassar/pvm3
> PVM_ARCH is DARWIN
> checking how to run the C preprocessor... gcc -E
> checking for egrep... grep -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking pvm3.h usability... yes
> checking pvm3.h presence... yes
> checking for pvm3.h... yes
> checking for main in -lpvm3... no
> Try to find libpvm3 ...
> Found in /Users/najinassar/pvm3/lib/DARWIN
> checking for pvmd... /Users/najinassar/pvm3/lib/pvmd
> checking for pvmgs... /Users/najinassar/pvm3/bin/DARWIN/pvmgs
> configure: creating ./config.status
> config.status: creating src/Makevars
> config.status: creating inst/pvmhosts
> ** libs
> ** arch - ppc
>
> gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99
> -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
> -I/Library/Frameworks/R.framework/Resources/include/ppc -I/include
> -I/usr/local/include   -DSOCKADHASLEN -DNOREXEC
> -DRSHCOMMAND=\"/usr/bin/rsh\" -DHASSTDLIB -DNEEDMENDIAN -DHASERRORVARS
> -DFAKEXDRFLOAT -DSYSERRISCONST -I/usr/include/malloc
> -I/System/Library/Frameworks/System.framework/Headers/bsd/sys -fPIC  -g -O2
> -c rpvm_core.c -o rpvm_core.o
> ** Removing
> '/Library/Frameworks/R.framework/Versions/2.5/Resources/library/rpvm'
> ** Restoring previous
> '/Library/Frameworks/R.framework/Versions/2.5/Resources/library/rpvm'
> rpvm_core.c:6:18: error: pvm3.h: No such file or directory
> rpvm_core.c: In function Œrpvm_chkerror¹:
>
>
> I've installed PVM (running quite fine under my terminal_bash
>
> MacG5:~ najinassar$ pvm
> pvm> quit
> quit
> pvmd still running.
>
> And PVM_ROOT is recognized
>
> MacG5:~ najinassar$ $PVM_ROOT
> -bash: /Users/najinassar/pvm3: is a directory
>
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