[R-SIG-Mac] Building BioC packages from source on MacOSX (R-2.3.0)

Benilton Carvalho bcarvalh at jhsph.edu
Mon Apr 10 17:00:29 CEST 2006


Hi All,

first of all, for those subscribed to bioc, my apologies for the 
cross-post.

i've been trying to build BioC packages on macosx, but i can't get it to work. 
i got rid of fink and installed the g77 that comes with R binary. then i built 
and installed the latest devel version of R using the sequence ./configure && 
make && make install

i built R-2.3.0 from the source (which is the one in my PATH), but when I 
try:

R CMD build Biobase/

from my svn dir, this is what i get (even if i use absolute paths):

** arch - Frameworks
/Library/Frameworks/R.framework/Resources/share/make/shlib.mk:3: 
/Library/Frameworks/R.framework/Resources/etc/Frameworks/Makeconf: No such file 
or directory
make: *** No rule to make target 
`/Library/Frameworks/R.framework/Resources/etc/Frameworks/Makeconf'. Stop.
chmod: /private/tmp/Rinst1800553001/Biobase/libs/Frameworks/*: No such file or 
directory

suggestions on how to proceed?

thanks,
b.



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