[R-SIG-Mac] mgcv

[Denis Chabot]

Hi,

I got no reply to my previous message: the latest version of mgcv is  
not available as a Mac binary on CRAN, and I get an error trying to  
compile it myself. Yet this extract from an answer to a question I  
posted on the general r list shows that I need the newest version,  
1.3-7:

...
Which version of mgcv do you use? The confusion probably stems from  
earlier versions of mgcv (< 1.3-5): the summary and anova methods  
used to have a column denoted Chi.sq even when the displayed  
statistic was computed as F. Recent versions of mgcv has
...

Hoping someone can explain the compiling error below,

Denis

Début du message réexpédié :

> De : Denis Chabot <chabotd at globetrotter.net>
> Date : 16 septembre 2005 09:11:44 HAE
> À : r-sig-mac at stat.math.ethz.ch
> Objet : mgcv
>
>
> Hi,
>
> Do you know why package mgcv, installed automatically with R (mgcv  
> 1.3-1 is installed with R 2.1.1) does not show up at all when  
> looking for Mac binaries on CRAN? Shouldn't we see v1.3-1 there, at  
> least?
> When looking at sources on CRAN, one sees that 1.3-7 is available.  
> Because 1.3-1 was compiled successfully for Mac, I tried to compile  
> 1.3-7 from within R-gui (1816) and failed. Do you know if a Mac  
> binary will be available soon or else how I can fix the errors  
> indicated below?
>
> Thanks in advance,
>
> Denis Chabot
>
>
>
>
> essai de l'URL 'http://probability.ca/cran/src/contrib/ 
> mgcv_1.3-7.tar.gz'
> Content type 'application/x-tar' length 244885 bytes
> URL ouverte
> ==================================================
> downloaded 239Kb
>
> * Installing *source* package 'mgcv' ...
> ** libs
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c gcv.c -o gcv.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c magic.c -o  
> magic.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c mat.c -o mat.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c matrix.c -o  
> matrix.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c mgcv.c -o  
> mgcv.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c qp.c -o qp.o
> gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
> include  -I/usr/local/include   -fno-common  -g -O2 -c tprs.c -o  
> tprs.o
> gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/ 
> lib -o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o  - 
> framework vecLib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2  
> -lg2c -lSystem  -framework R
> ld: warning
> The downloaded packages are in
>     /private/tmp/Rtmp8owdFh/downloaded_packages
> multiple definitions of symbol _xerbla_
> /Library/Frameworks/R.framework/R(print.lo) definition of _xerbla_
> /System/Library/Frameworks/Accelerate.framework/Versions/A/ 
> Frameworks/vecLib.framework/Versions/A/libBLAS.dylib(single module)  
> definition of _xerbla_
> ld: warning multiple definitions of symbol _signgam
> /Library/Frameworks/R.framework/R(lgamma.lo) definition of _signgam
> /usr/lib/libSystem.dylib(gamma9.o) definition of _signgam
> ld: gcv.o has external relocation entries in non-writable section  
> (__TEXT,__text) for symbols:
> restFP
> saveFP
> make: *** [mgcv.so] Error 1
> ERROR: compilation failed for package 'mgcv'
> essai de l'URL 'http://probability.ca/cran/bin/macosx/2.1/PACKAGES'
> Content type 'text/plain; charset=iso-8859-1' length 27756 bytes
> URL ouverte
>