[R-SIG-Mac] mgcv

Denis Chabot chabotd at globetrotter.net
Fri Sep 16 15:11:44 CEST 2005


Do you know why package mgcv, installed automatically with R (mgcv  
1.3-1 is installed with R 2.1.1) does not show up at all when looking  
for Mac binaries on CRAN? Shouldn't we see v1.3-1 there, at least?
When looking at sources on CRAN, one sees that 1.3-7 is available.  
Because 1.3-1 was compiled successfully for Mac, I tried to compile  
1.3-7 from within R-gui (1816) and failed. Do you know if a Mac  
binary will be available soon or else how I can fix the errors  
indicated below?

Thanks in advance,

Denis Chabot

essai de l'URL 'http://probability.ca/cran/src/contrib/ 
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downloaded 239Kb

* Installing *source* package 'mgcv' ...
** libs
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c gcv.c -o gcv.o
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c magic.c -o  
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c mat.c -o mat.o
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c matrix.c -o  
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c mgcv.c -o mgcv.o
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c qp.c -o qp.o
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c tprs.c -o tprs.o
gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib - 
o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o  -framework  
vecLib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -lg2c - 
lSystem  -framework R
ld: warning
The downloaded packages are in
multiple definitions of symbol _xerbla_
/Library/Frameworks/R.framework/R(print.lo) definition of _xerbla_
vecLib.framework/Versions/A/libBLAS.dylib(single module) definition  
of _xerbla_
ld: warning multiple definitions of symbol _signgam
/Library/Frameworks/R.framework/R(lgamma.lo) definition of _signgam
/usr/lib/libSystem.dylib(gamma9.o) definition of _signgam
ld: gcv.o has external relocation entries in non-writable section  
(__TEXT,__text) for symbols:
make: *** [mgcv.so] Error 1
ERROR: compilation failed for package 'mgcv'
essai de l'URL 'http://probability.ca/cran/bin/macosx/2.1/PACKAGES'
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