[R-SIG-Mac] R 2.1.1 available in DarwinPorts

Kjell Konis konis at stats.ox.ac.uk
Wed Sep 7 18:51:17 CEST 2005


Hi,

First of all, thanks for trying the port.  Do you have the latest  
version of DarwinPorts?  I have

[muffin] kjell> port version
Version: 1.012

If not you need to update it.

[muffin] kjell> sudo port selfupdate

At some point port just started noticing when cc_dynamic is required  
and linking against it.  Until yesterday I thought this was a  
"feature" but maybe it's just a (lucky) misconfiguration somewhere in  
my system.  (For a brief period I was using gcc 4.0 to to compile and  
cc_dynamic was not necessary - when I reverted to 3.3 I didn't put cc- 
dynamic in the Portfile because it was already being found.)

Anyway, let me know if updating solves the problem.

Kjell

On 6 Sep 2005, at 16:52, elijah wright wrote:

>
>
>> Subject: Re: [R-SIG-Mac] R 2.1.1 available in DarwinPorts
>> I just tried building from darwin ports today, and got the error  
>> below while bulding R.  To confirm, this is for darwin ports on  
>> Tiger, right? Any help appreciated, looks like there is some kind  
>> of symbol conflict.
>>
>
> i got the same error when i tried a build a couple of days ago -- i  
> hadn't had time to get back to it yet.  [and i have a radmind  
> overload of darwinports that contains a working R (from previous  
> build attempt), so i wasn't in a hurry to break it either...]
>
> Kjell, are there things we can do to help you?  Other than to  
> continue testing?  :)
>
> --elijah
>
>
>
>> gcc-3.3 -dynamiclib -L/opt/local/lib -dynamiclib -install_name
>> libR.dylib -compatibility_version 2.1.0  -current_version 2.1.1  -
>> headerpad_max_install_names -o libR.dylib  Rembedded.lo
>> CConverters.lo CommandLineArgs.lo Rdynload.lo Renviron.lo RNG.lo
>> apply.lo arithmetic.lo apse.lo array.lo attrib.lo base.lo bind.lo
>> builtin.lo character.lo coerce.lo colors.lo complex.lo connections.lo
>> context.lo cov.lo cum.lo dcf.lo datetime.lo debug.lo deparse.lo
>> deriv.lo dotcode.lo dounzip.lo dstruct.lo duplicate.lo engine.lo
>> envir.lo errors.lo eval.lo format.lo fourier.lo gevents.lo gram.lo
>> gram-ex.lo graphics.lo identical.lo internet.lo iosupport.lo
>> lapack.lo list.lo logic.lo main.lo mapply.lo match.lo memory.lo
>> model.lo names.lo objects.lo optim.lo optimize.lo options.lo par.lo
>> paste.lo pcre.lo platform.lo plot.lo plot3d.lo plotmath.lo print.lo
>> printarray.lo printvector.lo printutils.lo qsort.lo random.lo
>> regex.lo registration.lo relop.lo saveload.lo scan.lo seq.lo
>> serialize.lo size.lo sort.lo source.lo split.lo sprintf.lo startup.lo
>> subassign.lo subscript.lo subset.lo summary.lo sysutils.lo unique.lo
>> util.lo version.lo vfonts.lo xxxpr.lo `ls ../appl/*.lo ../nmath/
>> *.lo ../unix/*.lo  2>/dev/null` -framework vecLib -L/opt/local/lib/
>> gcc-3.4/gcc/powerpc-apple-darwin8.2.0/3.4.4 -L/opt/local/lib/ 
>> gcc-3.4 -
>> lg2c -lgcc_s -lSystemStubs -lSystem  ../extra/zlib/libz.a ../extra/
>> bzip2/libbz2.a ../extra/pcre/libpcre.a  -lintl -liconv -lc  -
>> lreadline  -lm -liconv


Here is cc_dynamic, right between readline and math:

gcc-3.3 -dynamiclib -L/opt/local/lib -dynamiclib -install_name  
libR.dylib -compatibility_version 2.1.0  -current_version 2.1.1  - 
headerpad_max_install_names -o libR.dylib  Rembedded.lo  
CConverters.lo CommandLineArgs.lo Rdynload.lo Renviron.lo RNG.lo  
apply.lo arithmetic.lo apse.lo array.lo attrib.lo base.lo bind.lo  
builtin.lo character.lo coerce.lo colors.lo complex.lo connections.lo  
context.lo cov.lo cum.lo dcf.lo datetime.lo debug.lo deparse.lo  
deriv.lo dotcode.lo dounzip.lo dstruct.lo duplicate.lo engine.lo  
envir.lo errors.lo eval.lo format.lo fourier.lo gevents.lo gram.lo  
gram-ex.lo graphics.lo identical.lo internet.lo iosupport.lo  
lapack.lo list.lo logic.lo main.lo mapply.lo match.lo memory.lo  
model.lo names.lo objects.lo optim.lo optimize.lo options.lo par.lo  
paste.lo pcre.lo platform.lo plot.lo plot3d.lo plotmath.lo print.lo  
printarray.lo printvector.lo printutils.lo qsort.lo random.lo  
regex.lo registration.lo relop.lo saveload.lo scan.lo seq.lo  
serialize.lo size.lo sort.lo source.lo split.lo sprintf.lo startup.lo  
subassign.lo subscript.lo subset.lo summary.lo sysutils.lo unique.lo  
util.lo version.lo vfonts.lo xxxpr.lo `ls ../appl/*.lo ../nmath/ 
*.lo ../unix/*.lo  2>/dev/null` -framework vecLib -L/Volumes/muffin/ 
DarwinPorts/lib/gcc-3.4/gcc/powerpc-apple-darwin8.2.0/3.4.4 -L/ 
Volumes/muffin/DarwinPorts/lib/gcc-3.4/gcc -L/Volumes/muffin/ 
DarwinPorts/lib/gcc-3.4 -lg2c -lgcc_s -lSystemStubs -lSystem  ../ 
extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a  - 
lintl -liconv -lc  -lreadline  -lcc_dynamic -lm -liconv



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