[R-SIG-Mac] R-app crashes when saving quartz graphics to pdf

Denis Chabot chabotd at globetrotter.net
Fri Oct 28 16:59:51 CEST 2005 

Hi, today I repeatedly crashed R-app when trying to save a quartz  
windows. I deleted my org.R-project.R.plist file but it did not help.

Here is what the crash report of OS X said:

Date/Time:      2005-10-28 10:54:53.678 -0400
OS Version:     10.4.2 (Build 8C46)
Report Version: 3

Command: R
Path:    /Applications/Stats/R.app/Contents/MacOS/R
Parent:  WindowServer [78]

Version: 1.13 (1915)

PID:    485
Thread: 0

Exception:  EXC_BAD_ACCESS (0x0001)
Codes:      KERN_PROTECTION_FAILURE (0x0002) at 0x00000000

Thread 0 Crashed:
0   libSystem.B.dylib                  0x900031e8 strlen + 8
1   org.R-project.R                    0x00004598 -[RController  
handleWriteConsole:] + 48 (crt.c:300)
2   org.R-project.R                    0x0000b2a4 Re_WriteConsole +  
196 (crt.c:300)
3   libR.dylib                         0x002d39b8 REvprintf + 264  
(printutils.c:578)
4   libR.dylib                         0x002d370c REprintf + 48  
(printutils.c:494)
5   libR.dylib                         0x0026233c Rf_PrintWarnings +  
280 (errors.c:356)
6   libR.dylib                         0x0026286c verrorcall_dflt +  
724 (errors.c:470)
7   libR.dylib                         0x00262990 Rf_errorcall + 172  
(errors.c:508)
8   libR.dylib                         0x00262aac Rf_error + 148  
(errors.c:531)
9   grDevices.so                       0x0542de74 PDF + 520 (devPS.c: 
5281)
10  libR.dylib                         0x0024ad78 do_External + 128  
(dotcode.c:756)
11  libR.dylib                         0x00265aec Rf_eval + 1544  
(eval.c:405)
12  libR.dylib                         0x00267288 do_begin + 136  
(eval.c:1058)
13  libR.dylib                         0x00265930 Rf_eval + 1100  
(eval.c:382)
14  libR.dylib                         0x00265f8c Rf_applyClosure +  
952 (eval.c:576)
15  libR.dylib                         0x00265b68 Rf_eval + 1668  
(eval.c:417)
16  libR.dylib                         0x00265930 Rf_eval + 1100  
(eval.c:382)
17  libR.dylib                         0x00267288 do_begin + 136  
(eval.c:1058)
18  libR.dylib                         0x00265930 Rf_eval + 1100  
(eval.c:382)
19  libR.dylib                         0x00265930 Rf_eval + 1100  
(eval.c:382)
20  libR.dylib                         0x00267288 do_begin + 136  
(eval.c:1058)
21  libR.dylib                         0x00265930 Rf_eval + 1100  
(eval.c:382)
22  libR.dylib                         0x00265f8c Rf_applyClosure +  
952 (eval.c:576)
23  libR.dylib                         0x00265b68 Rf_eval + 1668  
(eval.c:417)
24  libR.dylib                         0x0023ac10 protectedEval + 64  
(context.c:641)
25  libR.dylib                         0x0023ab88 R_ToplevelExec +  
208 (context.c:603)
26  libR.dylib                         0x0023ac64 R_tryEval + 60  
(context.c:656)
27  org.R-project.R                    0x0000d9a8 -[REngine  
evaluateExpressions:] + 180 (crt.c:300)
28  org.R-project.R                    0x0000db20 -[REngine  
evaluateString:] + 228 (crt.c:300)
29  org.R-project.R                    0x000152c0 -[RQuartz  
saveDocument:] + 348 (crt.c:300)
30  com.apple.AppKit                   0x936c4d2c -[NSApplication  
sendAction:to:from:] + 108
31  com.apple.AppKit                   0x9371f528 -[NSMenu  
performActionForItemAtIndex:] + 392
32  com.apple.AppKit                   0x9371f2ac -[NSCarbonMenuImpl  
performActionWithHighlightingForItemAtIndex:] + 104
33  com.apple.AppKit                   0x93626828  
_NSHandleCarbonMenuEvent + 372
34  com.apple.AppKit                   0x9362418c _DPSNextEvent + 1224
35  com.apple.AppKit                   0x93623b08 -[NSApplication  
nextEventMatchingMask:untilDate:inMode:dequeue:] + 116
36  org.R-project.R                    0x0000842c -[RController  
doProcessEvents:] + 96 (crt.c:300)
37  org.R-project.R                    0x00004e6c -[RController  
handleReadConsole:] + 84 (crt.c:300)
38  org.R-project.R                    0x0000affc Re_ReadConsole +  
116 (crt.c:300)
39  org.R-project.R                    0x00014868 RGUI_ReplIteration  
+ 112 (crt.c:300)
40  org.R-project.R                    0x000147dc RGUI_ReplConsole +  
148 (crt.c:300)
41  org.R-project.R                    0x00014730  
run_REngineRmainloop + 156 (crt.c:300)
42  org.R-project.R                    0x0000d6d4 -[REngine runREPL]  
+ 76 (crt.c:300)
43  com.apple.Foundation               0x92885cfc __NSFireTimer + 116
44  com.apple.CoreFoundation           0x9075ed10 __CFRunLoopDoTimer  
+ 184
45  com.apple.CoreFoundation           0x9074b688 __CFRunLoopRun + 1680
46  com.apple.CoreFoundation           0x9074ac3c  
CFRunLoopRunSpecific + 268
47  com.apple.HIToolbox                0x93129ac0  
RunCurrentEventLoopInMode + 264
48  com.apple.HIToolbox                0x93129154  
ReceiveNextEventCommon + 380
49  com.apple.HIToolbox                0x93128fc0  
BlockUntilNextEventMatchingListInMode + 96
50  com.apple.AppKit                   0x93623e44 _DPSNextEvent + 384
51  com.apple.AppKit                   0x93623b08 -[NSApplication  
nextEventMatchingMask:untilDate:inMode:dequeue:] + 116
52  com.apple.AppKit                   0x9362006c -[NSApplication  
run] + 472
53  com.apple.AppKit                   0x937108bc NSApplicationMain +  
452
54  org.R-project.R                    0x000020d0 _start + 392 (crt.c: 
267)
55  dyld                               0x8fe01048 _dyld_start + 60

Thread 1:
0   libSystem.B.dylib                  0x9001efcc select + 12
1   org.R-project.R                    0x00003828 -[RController  
readThread:] + 524 (crt.c:300)
2   com.apple.Foundation               0x92882f34  
forkThreadForFunction + 108
3   libSystem.B.dylib                  0x9002c3b4 _pthread_body + 96

Thread 2:
0   libSystem.B.dylib                  0x9004ca38  
syscall_thread_switch + 8
1   com.apple.Foundation               0x9289b330 +[NSThread  
sleepUntilDate:] + 152
2   com.apple.AppKit                   0x936c0b00 -[NSUIHeartBeat  
_heartBeatThread:] + 1100
3   com.apple.Foundation               0x92882f34  
forkThreadForFunction + 108
4   libSystem.B.dylib                  0x9002c3b4 _pthread_body + 96

Thread 3:
0   libSystem.B.dylib                  0x9002f66c kevent + 12
1   com.apple.DesktopServices          0x92792ad8  
TFSNotificationTask::FSNotificationTaskProc(void*) + 56
2   ...ple.CoreServices.CarbonCore     0x90b39690 PrivateMPEntryPoint  
+ 76
3   libSystem.B.dylib                  0x9002c3b4 _pthread_body + 96

Thread 4:
0   libSystem.B.dylib                  0x9002ca78  
semaphore_wait_signal_trap + 8
1   libSystem.B.dylib                  0x9003125c pthread_cond_wait +  
508
2   ...ple.CoreServices.CarbonCore     0x90b39880 MPWaitOnQueue + 224
3   com.apple.DesktopServices          0x92793330  
TNodeSyncTask::SyncTaskProc(void*) + 108
4   ...ple.CoreServices.CarbonCore     0x90b39690 PrivateMPEntryPoint  
+ 76
5   libSystem.B.dylib                  0x9002c3b4 _pthread_body + 96

Thread 0 crashed with PPC Thread State 64:
   srr0: 0x00000000900031e8 srr1:  
0x000000000200f030                        vrsave: 0x0000000000000000
     cr: 0x24044442          xer: 0x0000000000000004   lr:  
0x0000000000004598  ctr: 0x00000000900031e0
     r0: 0x0000000000004598   r1: 0x00000000bfff3c20   r2:  
0x0000000001844a7c   r3: 0x0000000000000000
     r4: 0x00000000909bfb54   r5: 0x0000000000000000   r6:  
0x00000000bfff381c   r7: 0x00000000ffffffff
     r8: 0x00000000bfff3704   r9: 0x0000000000000000  r10:  
0x0000000000000000  r11: 0x000000000003b144
    r12: 0x00000000900031e0  r13: 0x0000000000000000  r14:  
0x000000000586b608  r15: 0x000000000543dc74
    r16: 0x0000000001ed8ea8  r17: 0x0000000001ee1ca0  r18:  
0x0000000001d4b2d8  r19: 0x0000000001cfbe48
    r20: 0x00000000003a222c  r21: 0x00000000003a222c  r22:  
0x00000000003a222c  r23: 0x00000000003a222c
    r24: 0x000000000003b1ec  r25: 0x000000000003b1ec  r26:  
0x000000000003b1ec  r27: 0x0000000000000000
    r28: 0x00000000bfff3d30  r29: 0x000000000039c3d4  r30:  
0x00000000011e69a0  r31: 0x0000000000004568

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1.4.1    /System/Library/Frameworks/AudioToolbox.framework/Versions/A/ 
AudioToolbox
0x94199000 - 0x94199fff com.apple.audio.units.AudioUnit 1.4    / 
System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
0x9419b000 - 0x942fafff com.apple.QuartzCore 1.4.1    /System/Library/ 
Frameworks/QuartzCore.framework/Versions/A/QuartzCore
0x94342000 - 0x9437ffff libsqlite3.0.dylib     /usr/lib/ 
libsqlite3.0.dylib
0x94387000 - 0x943d2fff libGLImage.dylib     /System/Library/ 
Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x94573000 - 0x94582fff libCGATS.A.dylib     /System/Library/ 
Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ 
CoreGraphics.framework/Versions/A/Resources/libCGATS.A.dylib
0x9458a000 - 0x94596fff libCSync.A.dylib     /System/Library/ 
Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ 
CoreGraphics.framework/Versions/A/Resources/libCSync.A.dylib
0x945db000 - 0x945effff libRIP.A.dylib     /System/Library/Frameworks/ 
ApplicationServices.framework/Versions/A/Frameworks/ 
CoreGraphics.framework/Versions/A/Resources/libRIP.A.dylib
0x945f5000 - 0x9485ffff com.apple.QuickTime 7.0.3    /System/Library/ 
Frameworks/QuickTime.framework/Versions/A/QuickTime
0x958dd000 - 0x95967fff com.apple.WebKit 412.7    /System/Library/ 
Frameworks/WebKit.framework/Versions/A/WebKit
0x959c1000 - 0x95aa3fff com.apple.JavaScriptCore 412.5    /System/ 
Library/Frameworks/WebKit.framework/Versions/A/Frameworks/ 
JavaScriptCore.framework/Versions/A/JavaScriptCore
0x95af7000 - 0x95de9fff com.apple.WebCore 415.13.2    /System/Library/ 
Frameworks/WebKit.framework/Versions/A/Frameworks/WebCore.framework/ 
Versions/A/WebCore
0x95f6c000 - 0x95f95fff libxslt.1.dylib     /usr/lib/libxslt.1.dylib
0x962b7000 - 0x962b9fff com.apple.ExceptionHandling 1.2 (???)    / 
System/Library/Frameworks/ExceptionHandling.framework/Versions/A/ 
ExceptionHandling
0x972a9000 - 0x972c8fff com.apple.vecLib 3.1.1 (vecLib 3.1.1)    / 
System/Library/Frameworks/vecLib.framework/Versions/A/vecLib
0x97a94000 - 0x97aa1fff com.apple.agl 2.5.6 (AGL-2.5.6)    /System/ 
Library/Frameworks/AGL.framework/Versions/A/AGL
0x9947a000 - 0x99d2dfff com.apple.QuickTimeComponents.component  
7.0.3    /System/Library/QuickTime/QuickTimeComponents.component/ 
Contents/MacOS/QuickTimeComponents

Model: PowerBook5,6, BootROM 4.9.1f1, 1 processors, PowerPC G4   
(1.2), 1.67 GHz, 1 GB
Graphics: ATI Mobility Radeon 9700, ATY,RV360M11, AGP, 64 MB
Memory Module: SODIMM0/J25LOWER, 512 MB, DDR SDRAM, PC2700U-25330
Memory Module: SODIMM1/J25UPPER, 512 MB, DDR SDRAM, PC2700U-25330
AirPort: AirPort Extreme, 400.17 (3.90.34.0.p11)
Modem: Jump, , V.92, Version 1.0,
Bluetooth: Version 1.6.0f2, 2 service, 1 devices, 0 incoming serial  
ports
Network Service: Ethernet intégré, Ethernet, en0
PCI Card: TXN,PCIXXXX-00, cardbus, PC Card
Parallel ATA Device: MATSHITADVD-R   UJ-835E,
Parallel ATA Device: FUJITSU MHT2080AH, 74.53 GB
USB Device: Bluetooth HCI, , Up to 12 Mb/sec, 500 mA
USB Device: Apple Internal Keyboard/Trackpad, Apple Computer, Up to  
12 Mb/sec, 500 mA
FireWire Device: HDD 2.5" 2 ports, 1394, Up to 400 Mb/sec
FireWire Device: unknown_device, unknown_value, Up to 400 Mb/sec


Sincerely,

Denis

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