[R-SIG-Mac] Unexpected crash
sebastien durand
sebastien.durand at UMontreal.CA
Fri May 13 21:51:08 CEST 2005
To whom I might reach!
In this mail you have
1- My crash log
2- My function
3- My call
So that you can reproduce the crash...
Please note that this function is behaving well in both the console,
and in the R.app 2.0.1
Your help would be greatly appreciated.
Thanks
Sébastien Durand
###########
#FUNCTION#
###########
altitude.filter<-
function(x,alt,trigger=0.6,width=6,height=6,plotquartz=TRUE,plot.save=NU
LL,quiet=TRUE){
#x is a time sequence
#alt is the altitudes values
#trigger= in meters, the altitude difference or jump relative to the
previous and after echo that is required to considered the point
wrong...
avant<-abs(alt[2:(length(alt)-1)]-alt[1:(length(alt)-2)])
apres<-abs(alt[2:(length(alt)-1)]-alt[3:(length(alt))])
#Si l'on retrouve de chaque coté d'une altitude un ecart de plus de
0.6 m nous le supprimons
rem<-which(avant>=0.6 & apres>=0.6)+1
if(length(plot.save)!=0){
nom<-"filter.alt"
path<-paste(plot.save,"/",nom,".pdf",sep="")
pdf(file = path, onefile = TRUE,width=width,height=height,
family="Helvetica", encoding="MacRoman.enc",pagecentre=TRUE)
plot(x,alt[],"l",main="Original and filtered altitude values");
if(length(rem)!=0){
lines(x[-rem],alt[-(rem)],col="red")
}else{
lines(x[],alt[],col="red")
cat("There is no erroneous altitude value found\n")
}
dev.off()
}else{}
if(plotquartz==TRUE){
x11(width=width,height=height)
plot(x,alt,main="Original and filtered altitude values");
if(length(rem)!=0){
lines(x[-rem],alt[-(rem)],col="red")
}else{
lines(x[],alt[],col="red")
cat("There is no erroneous altitude value found\n")
}
}else{}
if(quiet==FALSE)
cat("Les échos supprimés ayant de mauvaise valeurs d'altitude sont
les suivantes",rem,"\n")
if(length(rem)!=0){
x<-x[-rem]
alt<-alt[-rem]
}else{}
return(list(rem=rem,alt=alt))
}
############
# Function call#
############
source("~/STATSR/_Subroutines/_Filters/altitude.filter.R")
a<-system.time(tmp<-altitude.filter(x=c(1:
1000),alt=rnorm(1000),trigger=0.6,width=6,height=6,plotquartz=TRUE,plot.
save=NULL,quiet=TRUE))
###########
#R.crash.log#
###########
===== Fri May 13 2005 ===== 15:23:27 America/Montreal =====
**********
Host Name: DoubleG5.local
Date/Time: 2005-05-13 15:23:55 -0400
OS Version: 10.3.9 (Build 7W98)
Report Version: 2
Command: R
Path: /Applications/R.app/Contents/MacOS/R
Version: 1.10 (1.10)
PID: 18488
Thread: 0
Exception: EXC_BAD_ACCESS (0x0001)
Codes: KERN_PROTECTION_FAILURE (0x0002) at 0x00000000
Thread 0 Crashed:
0 libSystem.B.dylib 0x90007220 strlen + 0x20
1 org.R-project.R 0x00004d30 -[RController
handleWriteConsole:] + 0x30
2 org.R-project.R 0x0000b530 Re_WriteConsole + 0xc4
3 libR.dylib 0x010d23c0 Rcons_vprintf + 0xcc
(printutils.c:478)
4 libR.dylib 0x01034eec stdout_vfprintf + 0x40
(connections.c:1528)
5 libR.dylib 0x010d2450 Rvprintf + 0x74
(printutils.c:494)
6 libR.dylib 0x010d22a4 Rprintf + 0x30
(printutils.c:444)
7 libR.dylib 0x01022398 do_cat + 0x450
(builtin.c:400)
8 libR.dylib 0x0109b5c0 do_internal + 0x188
(names.c:1078)
9 libR.dylib 0x010667e0 Rf_eval + 0x448
(eval.c:382)
10 libR.dylib 0x01068114 do_begin + 0x88
(eval.c:1058)
11 libR.dylib 0x010667e0 Rf_eval + 0x448
(eval.c:382)
12 libR.dylib 0x01066e30 Rf_applyClosure + 0x3b8
(eval.c:576)
13 libR.dylib 0x01066a0c Rf_eval + 0x674
(eval.c:417)
14 libR.dylib 0x01068114 do_begin + 0x88
(eval.c:1058)
15 libR.dylib 0x010667e0 Rf_eval + 0x448
(eval.c:382)
16 libR.dylib 0x01066e30 Rf_applyClosure + 0x3b8
(eval.c:576)
17 libR.dylib 0x01066a0c Rf_eval + 0x674
(eval.c:417)
18 libR.dylib 0x0106898c do_set + 0xe0
(eval.c:1309)
19 libR.dylib 0x010667e0 Rf_eval + 0x448
(eval.c:382)
20 org.R-project.R 0x00012e60 RGUI_ReplIteration +
0x1f4
21 org.R-project.R 0x00012c50 RGUI_ReplConsole + 0x94
22 org.R-project.R 0x00012ba4 run_REngineRmainloop +
0x9c
23 org.R-project.R 0x0000d658 -[REngine runREPL] + 0x34
24 com.apple.Foundation 0x90a23a4c __NSFireTimer + 0x68
25 com.apple.CoreFoundation 0x901c45f8 __CFRunLoopDoTimer + 0xf4
26 com.apple.CoreFoundation 0x901c1958 __CFRunLoopRun + 0x5c8
27 com.apple.CoreFoundation 0x901c5e6c CFRunLoopRunSpecific +
0x148
28 com.apple.HIToolbox 0x92885f60
RunCurrentEventLoopInMode + 0xac
29 com.apple.HIToolbox 0x9288c6c8 ReceiveNextEventCommon +
0x17c
30 com.apple.HIToolbox 0x928ae6a0
BlockUntilNextEventMatchingListInMode + 0x60
31 com.apple.AppKit 0x92e826dc _DPSNextEvent + 0x180
32 com.apple.AppKit 0x92e9915c -[NSApplication
nextEventMatchingMask:untilDate:inMode:dequeue:] + 0x74
33 com.apple.AppKit 0x92ead4dc -[NSApplication run] +
0x21c
34 com.apple.AppKit 0x92f69bec NSApplicationMain + 0x1d0
35 org.R-project.R 0x000028f0 _start + 0x188
(crt.c:267)
36 dyld 0x8fe1a278 _dyld_start + 0x64
Thread 1:
0 libSystem.B.dylib 0x9000b42c select + 0xc
1 org.R-project.R 0x00003fd4 -[RController
readThread:] + 0x20c
2 com.apple.Foundation 0x90a6a510 forkThreadForFunction +
0x6c
3 libSystem.B.dylib 0x90024910 _pthread_body + 0x28
Thread 2:
0 libSystem.B.dylib 0x900127b8 syscall_thread_switch +
0x8
1 com.apple.Foundation 0x90a33330 +[NSThread
sleepUntilDate:] + 0x98
2 com.apple.AppKit 0x92e7a880 -[NSUIHeartBeat
_heartBeatThread:] + 0x494
3 com.apple.Foundation 0x90a6a510 forkThreadForFunction +
0x6c
4 libSystem.B.dylib 0x90024910 _pthread_body + 0x28
Thread 3:
0 libSystem.B.dylib 0x90018e18
semaphore_timedwait_signal_trap + 0x8
1 libSystem.B.dylib 0x9000e9d4 _pthread_cond_wait +
0x268
2 ...ple.CoreServices.CarbonCore 0x902c5a50 MPWaitOnQueue + 0xe0
3 com.apple.DesktopServices 0x90948e7c
TNodeSyncTask::SyncTaskProc(void*) + 0x70
4 ...ple.CoreServices.CarbonCore 0x902f6b90 PrivateMPEntryPoint +
0x4c
5 libSystem.B.dylib 0x90024910 _pthread_body + 0x28
PPC Thread State:
srr0: 0x90007220 srr1: 0x0000f030 vrsave: 0x00000000
cr: 0x22044442 xer: 0x00000000 lr: 0x00004d30 ctr: 0x90007200
r0: 0x00004d30 r1: 0xbfff9de0 r2: 0x01849634 r3: 0xfffffffc
r4: 0x00000000 r5: 0xfefefeff r6: 0x80808080 r7: 0x00000047
r8: 0xbfff9914 r9: 0x00000000 r10: 0x00000000 r11: 0x00036138
r12: 0x90007200 r13: 0x0695f920 r14: 0x00000000 r15: 0x00000003
r16: 0x01b215a8 r17: 0x7fffffff r18: 0x00000000 r19: 0xbfffc3b0
r20: 0x018749b0 r21: 0x01b21628 r22: 0x01dfa578 r23: 0x00000001
r24: 0x0003b478 r25: 0x0003b478 r26: 0x0003b478 r27: 0x00000000
r28: 0xbfff9ef0 r29: 0x011751f8 r30: 0x003c1020 r31: 0x00004d00
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