[R-SIG-Mac] Warning during source package installation

Max Manfrin mmanfrin at ulb.ac.be
Mon Jan 31 10:56:48 CET 2005


Yes, the package loads and works.

So I don't have to worry.... ;)

Ok, I trust you :D

On 31 Jan 2005, at 10:20, stefano iacus wrote:

> The warnings are "ok" in the sense that there is a known duplication  
> of symbol names. You don't need to worry about that.
>
> In the end of your report instead, it seems to be a permission problem  
> "chmod etc etc".
>
> Does the lazy package load and work Max?
>
> stefano
>
> On Jan 31, 2005, at 10:13 AM, Max Manfrin wrote:
>
>> I got some warning during the installation of a source package and I  
>> don't understand what is the problem... can anybody help me out?
>>
>> My configuration is:
>> Mac OS X 10.3.7
>> R 2.0.1 - R gui 1.01
>>
>> trying URL `http://cran.r-project.org/src/contrib/lazy_1.2-14.tar.gz'
>> Content type `application/x-tar' length 20691 bytes
>> opened URL
>> ==================================================
>> downloaded 20Kb
>>
>> * Installing *source* package 'lazy' ...
>> ** libs
>> gcc -no-cpp-precomp  
>> -I/Library/Frameworks/R.framework/Resources/include
>>  -I/usr/local/include   -fno-common  -g -O2 -c lazy.c -o lazy.o
>> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o
>> lazy.so lazy.o  -lcc_dynamic -framework R
>> ld: warning multiple definitions of symbol _xerbla_
>> /Library/Frameworks/R.framework/R(print.lo) definition of _xerbla_
>> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/
>> vecLib.framework/Versions/A/libBLAS.dylib(single module) definition of
>> _xerbla_
>> ld: warning multiple definitions of symbol _crc32
>> /Library/Frameworks/R.framework/R(crc32.lo) definition of _crc32
>> /usr/lib/libz.1.dylib(crc32.o) definition of _crc32
>> ld: warning multiple definitions of symbol _get_crc_table
>> /Library/Frameworks/R.framework/R(crc32.lo) definition of  
>> _get_crc_table
>> /usr/lib/libz.1.dylib(crc32.o) definition of _get_crc_table
>> ld: warning multiple definitions of symbol _deflate
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflate
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflate
>> ld: warning multiple definitions of symbol _deflateCopy
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of  
>> _deflateCopy
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateCopy
>> ld: warning multiple definitions of symbol _deflateReset
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of
>> _deflateReset
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateReset
>> ld: warning multiple definitions of symbol _deflateSetDictionary
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of
>> _deflateSetDictionary
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateSetDictionary
>> ld: warning multiple definitions of symbol _deflateInit2_
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of
>> _deflateInit2_
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateInit2_
>> ld: warning multiple definitions of symbol _deflateEnd
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of  
>> _deflateEnd
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateEnd
>> ld: warning multiple definitions of symbol _deflateParams
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of
>> _deflateParams
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateParams
>> ld: warning multiple definitions of symbol _deflateInit_
>> /Library/Frameworks/R.framework/R(deflate.lo) definition of
>> _deflateInit_
>> /usr/lib/libz.1.dylib(deflate.o) definition of _deflateInit_
>> ld: warning multiple definitions of symbol _zError
>> /Library/Frameworks/R.framework/R(zutil.lo) definition of _zError
>> /usr/lib/libz.1.dylib(zutil.o) definition of _zError
>> ld: warning multiple definitions of symbol _zlibVersion
>> /Library/Frameworks/R.framework/R(zutil.lo) definition of _zlibVersion
>> /usr/lib/libz.1.dylib(zutil.o) definition of _zlibVersion
>> ld: warning multiple definitions of symbol _inflateEnd
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of  
>> _inflateEnd
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateEnd
>> ld: warning multiple definitions of symbol _inflateSync
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of  
>> _inflateSync
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateSync
>> ld: warning multiple definitions of symbol _inflateSyncPoint
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of
>> _inflateSyncPoint
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateSyncPoint
>> ld: warning multiple definitions of symbol _inflate
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflate
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflate
>> ld: warning multiple definitions of symbol _inflateSetDictionary
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of
>> _inflateSetDictionary
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateSetDictionary
>> ld: warning multiple definitions of symbol _inflateInit2_
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of
>> _inflateInit2_
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateInit2_
>> ld: warning multiple definitions of symbol _inflateReset
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of
>> _inflateReset
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateReset
>> ld: warning multiple definitions of symbol _inflateInit_
>> /Library/Frameworks/R.framework/R(inflate.lo) definition of
>> _inflateInit_
>> /usr/lib/libz.1.dylib(inflate.o) definition of _inflateInit_
>> ld: warning multiple definitions of symbol _adler32
>> /Library/Frameworks/R.framework/R(adler32.lo) definition of _adler32
>> /usr/lib/libz.1.dylib(adler32.o) definition of _adler32
>> ld: warning multiple definitions of symbol _BC
>> /Library/Frameworks/R.framework/Versions/2.0.1/Resources/lib/
>> libreadline.4.3.dylib(terminal.so) definition of _BC
>> /usr/lib/libncurses.5.dylib(lib_termcap.o) definition of _BC
>> ld: warning multiple definitions of symbol _UP
>> /Library/Frameworks/R.framework/Versions/2.0.1/Resources/lib/
>> libreadline.4.3.dylib(terminal.so) definition of _UP
>> /usr/lib/libncurses.5.dylib(lib_termcap.o) definition of _UP
>> ld: warning multiple definitions of symbol _PC
>> /Library/Frameworks/R.framework/Versions/2.0.1/Resources/lib/
>> libreadline.4.3.dylib(terminal.so) definition of _PC
>> /usr/lib/libncurses.5.dylib(lib_tputs.o) definition of _PC
>> ld: warning multiple definitions of symbol _gzeof
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzeof
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzeof
>> ld: warning multiple definitions of symbol _gzclose
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzclose
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzclose
>> ld: warning multiple definitions of symbol _gzdopen
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzdopen
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzdopen
>> ld: warning multiple definitions of symbol _gzerror
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzerror
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzerror
>> ld: warning multiple definitions of symbol _gzflush
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzflush
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzflush
>> ld: warning multiple definitions of symbol _gzgetc
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzgetc
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzgetc
>> ld: warning multiple definitions of symbol _gzgets
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzgets
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzgets
>> ld: warning multiple definitions of symbol _gzopen
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzopen
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzopen
>> ld: warning multiple definitions of symbol _gzprintf
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzprintf
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzprintf
>> ld: warning multiple definitions of symbol _gzputc
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzputc
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzputc
>> ld: warning multiple definitions of symbol _gzputs
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzputs
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzputs
>> ld: warning multiple definitions of symbol _gzread
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzread
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzread
>> ld: warning multiple definitions of symbol _gzrewind
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzrewind
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzrewind
>> ld: warning multiple definitions of symbol _gzseek
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzseek
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzseek
>> ld: warning multiple definitions of symbol _gzsetparams
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzsetparams
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzsetparams
>> ld: warning multiple definitions of symbol _gztell
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gztell
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gztell
>> ld: warning multiple definitions of symbol _gzwrite
>> /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzwrite
>> /usr/lib/libz.1.dylib(gzio.o) definition of _gzwrite
>> ** R
>> ** inst
>> ** help
>>>>> Building/Updating help pages for package 'lazy'
>>      Formats: text html latex example
>>   lazy                              text    html    latex   example
>>   lazy.control                      text    html    latex
>>   predict.lazy                      text    html    latex   example
>> * DONE (lazy)
>> chmod:
>> /Library/Frameworks/R.framework/Versions/2.0.1/Resources/library/ 
>> R.css:
>> Operation not permitted
>>
>> Delete downloaded files (y/N)? y
>>
>> ---------------------------------------------------------------------- 
>> ---------------
>> Max MANFRIN
>>
>> IRIDIA CP 194/6                         mmanfrin at ulb.ac.be
>> Universite' Libre de Bruxelles  http://iridia.ulb.ac.be/~mmanfrin/
>> Avenue F. Roosevelt, 50
>> 1050 Bruxelles                            Tel +32 (0)2 650 3168
>> Belgium                                        Fax +32 (0)2 650 2715
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>
>
>
------------------------------------------------------------------------ 
-------------
Max MANFRIN

IRIDIA CP 194/6                         mmanfrin at ulb.ac.be
Universite' Libre de Bruxelles  http://iridia.ulb.ac.be/~mmanfrin/
Avenue F. Roosevelt, 50
1050 Bruxelles                            Tel +32 (0)2 650 3168
Belgium                                        Fax +32 (0)2 650 2715



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