[R-SIG-Mac] installing Lindsey's package on a mac

Thomas Lumley tlumley at u.washington.edu
Wed Jul 28 21:42:43 CEST 2004


Do you have the developer tools installed?  The package needs C and
Fortran compilers.  I get different error messages (below).

In any case it doesn't seem to work, because of a problem in dist.c.

	-thomas

gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include   -fno-common  -g -O2 -c cutil.c -o cutil.o
gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include   -fno-common  -g -O2 -c dist.c -o dist.o
g77   -fno-common  -g -O2 -c gettvc.f -o gettvc.o
gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include   -fno-common  -g -O2 -c romberg.c -o romberg.o
gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include   -fno-common  -g -O2 -c toms614.c -o toms614.o
gcc -bundle -flat_namespace -undefined suppress -o rmutil.so cutil.o
dist.o gettvc.o romberg.o toms614.o -L/usr/local/lib
-L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4
-L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../.. -lfrtbegin -lg2c
-lSystem
ld: dist.o has external relocation entries in non-writable section
(__TEXT,__text) for symbols:
restFP
saveFP


On Wed, 28 Jul 2004, Anne G wrote:

>
> This is the console.log
> Mac OS X Version 10.3.4 (Build 7H63)
> 2004-07-28 09:03:51 -0400
> Authentication Service: Started
>
> * Installing *source* package 'rmutil' ...
> tar: R-ex: Cannot stat: (null)
> tar: help: Cannot stat: (null)
> tar: html: Cannot stat: (null)
> tar: latex: Cannot stat: (null)
> tar: Error exit delayed from previous errors
> ** libs
> /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1:
> make: command not found
> ERROR: compilation failed for package 'rmutil'
>
> Does this help?
>
> On Wed, 28 Jul 2004, Anne G wrote:
>
> > Hi
> >
> > I went to
> > http://cran.us.r-project.org/other-software.htmlhttp://cran.us.r-project.org/other-software.html
> > and then to
> > http://popgen0146uns50.unimaas.nl/~jlindsey/rcode.html
> > to download rmutil.tgz and gnlm.tgz.
> >
> > I have a mac OSX, 10.3.4, R 1.9.0
> > I decompress the two files, take out the makefile from the
> > scr directory.
> > then in the R menu, I choose
> > packages, install from local files, and then I select the
> > one of the folder on the desktop.
> > I get the error message
> > install.from.file(pkg="/Users/anne/Desktop/rmutil")
> > 	npackage installation failed
> >
> > Anyone has had that problem before and know how to fix it?
> >
> > thanks
> >
> > Anne
> >
> > _______________________________________________
> > R-SIG-Mac mailing list
> > R-SIG-Mac at stat.math.ethz.ch
> > https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
> >
>
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Thomas Lumley			Assoc. Professor, Biostatistics
tlumley at u.washington.edu	University of Washington, Seattle



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